Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_P15
(1208 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88167-3|AAB42224.2| 363|Caenorhabditis elegans Hypothetical pr... 97 3e-20
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 54 2e-07
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 48 2e-05
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 42 0.001
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 37 0.033
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 37 0.033
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 37 0.033
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 35 0.13
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 35 0.13
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 35 0.13
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 34 0.18
AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical ... 34 0.23
AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-l... 31 1.2
AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : short... 31 1.2
AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical ... 31 1.6
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 31 2.2
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 30 2.9
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 29 5.0
AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical ... 29 5.0
U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical pr... 29 6.6
U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical pr... 29 6.6
>U88167-3|AAB42224.2| 363|Caenorhabditis elegans Hypothetical
protein D2092.4 protein.
Length = 363
Score = 96.7 bits (230), Expect = 3e-20
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Frame = +2
Query: 350 DDELLELIXXKXKLIVLFT---KQNCETCKKLEQHVESLQEDFKKHLNAMSVKTVNSHLA 520
+D + E++ K +V+F K C TC + VE + +D + VKT + +A
Sbjct: 82 EDRIDEILRDASKNLVIFLYDGKVPCPTCTEALSEVEEIDDDIEATGYVQVVKTNDRSVA 141
Query: 521 RLYNPSKEPALIFYRHGVALLYSGEADENE-IYGFFEKNQTPAVKELTDKIFEHLTQA-A 694
R + P+L++YR +LY G+ ++E + + ++ A +LTD FE T + +
Sbjct: 142 RELGINVFPSLVYYRRKNPILYDGDFKDSETLLRWLRAHEEVATWDLTDDTFESRTDSHS 201
Query: 695 TGATTGDWFVMFYGAACVECQRLHAVWESVGATLKSRINVARIDASLAGVNTAKRFHVGK 874
+ DWFVMFY A +WE+V L+ +NV +I+ S+ + +RFH+ +
Sbjct: 202 PDEGSIDWFVMFYDADEGNSNAFVPLWETVAHKLRGLVNVGKIEISV-NDDVTERFHIEE 260
Query: 875 --XPAFLLFRLGKVYRY 919
P FLLF GK+YRY
Sbjct: 261 RDCPVFLLFHRGKMYRY 277
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 54.4 bits (125), Expect = 2e-07
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +2
Query: 611 IYGFFEKNQTPAVKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRLHAVWESVGA 790
+Y N AV +L+DK + + G WFV FY C C+RLH VW+ VG
Sbjct: 18 VYDTEATNPPTAVLDLSDKFLDVKDE-------GMWFVEFYAPWCAHCKRLHPVWDQVGH 70
Query: 791 TLKSR---INVARIDASLAGVNTAKRFHVGKXPAFLLFRLGKVYRY 919
TL I V ++D + A + + P L FR G V Y
Sbjct: 71 TLSDSNLPIRVGKLDCTRFPA-VANKLSIQGYPTILFFRNGHVIDY 115
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 47.6 bits (108), Expect = 2e-05
Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 6/187 (3%)
Frame = +2
Query: 389 LIVLFTKQNCETCKKLEQHVESLQEDFKKHLNAMSVKTVNSHLARLYNPSKEPALIFYRH 568
++V F C CK L E L + TV + L + + P L F++
Sbjct: 56 VLVKFYAPWCGHCKHLAPEYEKASSKVSIPLAKVDA-TVETELGKRFEIQGYPTLKFWKD 114
Query: 569 GVALL-YSGEADENEIYGFFEKNQTPAVKELTDKIFEHLTQAATGATTGDWFVM--FYGA 739
G Y G DE I + E P K +++ T+ + + V+ FY
Sbjct: 115 GKGPNDYDGGRDEAGIVEWVESRVDPNYKPPPEEVVTLTTENFDDFISNNELVLVEFYAP 174
Query: 740 ACVECQRLHAVWESVGATLK---SRINVARIDASLAGVNTAKRFHVGKXPAFLLFRLGKV 910
C C++L +E LK S++ + ++DA++ + ++ V P + R G+
Sbjct: 175 WCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIE-KDLGTKYGVSGYPTMKIIRNGRR 233
Query: 911 YRYDLPK 931
+ Y+ P+
Sbjct: 234 FDYNGPR 240
Score = 31.9 bits (69), Expect = 0.94
Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 4/102 (3%)
Frame = +2
Query: 365 ELIXXKXKLIVLFTKQNCETCKKLEQHVESLQEDFKKHLNAMSV----KTVNSHLARLYN 532
+ I ++V F C CKKL E + K + + + T+ L Y
Sbjct: 159 DFISNNELVLVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEKDLGTKYG 218
Query: 533 PSKEPALIFYRHGVALLYSGEADENEIYGFFEKNQTPAVKEL 658
S P + R+G Y+G + I + PA K+L
Sbjct: 219 VSGYPTMKIIRNGRRFDYNGPREAAGIIKYMTDQSKPAAKKL 260
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +2
Query: 647 VKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRLHAVWESVGATLKSRINVARID 826
V ELTD FE L + W V F+ C C+ L W++ + LK ++ + +D
Sbjct: 166 VVELTDANFEDLVLNSKDI----WLVEFFAPWCGHCKSLEPQWKAAASELKGKVRLGALD 221
Query: 827 ASLAGVNTAKRFHVGKXPAFLLFRLG 904
A++ V A +F + P F G
Sbjct: 222 ATVHTV-VANKFAIRGFPTIKYFAPG 246
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 36.7 bits (81), Expect = 0.033
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +2
Query: 716 WFVMFYGAACVECQRLHAVWESVGATLKSRINVARIDASLAGVNTAKRFHVGKXPAFLLF 895
W V F+ C CQ+L W+ + R+ +DA+ A + A++F + P F
Sbjct: 175 WMVEFFAPWCGHCQKLEPEWKKAAEEMGGRVKFGALDAT-AHESIAQKFGIRGFPTIKFF 233
Query: 896 RLG 904
G
Sbjct: 234 APG 236
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 644 AVKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRLHAVWESVGATLKSRINVARI 823
+V ELTD F+ A + W V FY C C+ L ++ LK + I
Sbjct: 25 SVFELTDSNFD----AKVLKSDRIWIVEFYAPYCGHCKSLVPEYKKAAKLLKGIAEIGAI 80
Query: 824 DASL 835
DA++
Sbjct: 81 DATV 84
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 36.7 bits (81), Expect = 0.033
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 722 VMFYGAACVECQRLHAVWESVGATLK---SRINVARIDASLAGVNTAKRFHVGKXPAFLL 892
V FY CV C+ L ++ LK S I +A++DA+ A +F V P L
Sbjct: 45 VKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDAT-ENQALASKFEVRGYPTILY 103
Query: 893 FRLGKVYRY 919
F+ GK +Y
Sbjct: 104 FKSGKPTKY 112
Score = 33.1 bits (72), Expect = 0.40
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 719 FVMFYGAACVECQRLHAVWESVGATLKSRINV--ARIDASL 835
FV FY C C++L VW+ + +S NV A++DA+L
Sbjct: 385 FVKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATL 425
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 36.7 bits (81), Expect = 0.033
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 722 VMFYGAACVECQRLHAVWESVGATLK---SRINVARIDASLAGVNTAKRFHVGKXPAFLL 892
V FY CV C+ L ++ LK S I +A++DA+ A +F V P L
Sbjct: 45 VKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDAT-ENQALASKFEVRGYPTILY 103
Query: 893 FRLGKVYRY 919
F+ GK +Y
Sbjct: 104 FKSGKPTKY 112
Score = 33.1 bits (72), Expect = 0.40
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 719 FVMFYGAACVECQRLHAVWESVGATLKSRINV--ARIDASL 835
FV FY C C++L VW+ + +S NV A++DA+L
Sbjct: 385 FVKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATL 425
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 34.7 bits (76), Expect = 0.13
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Frame = +2
Query: 353 DELLELIXXKXKLIVLFTKQNCETCKKLEQHVESLQEDFKKHLNAMSV----KTVNSHLA 520
D E+I ++V F C CK L K+ + + + TV+ ++
Sbjct: 31 DNFDEVINGNEFILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVS 90
Query: 521 RLYNPSKEPALIFYRHGVALLYSGEADENEIYGFFEKNQTPAVKELTD 664
+ P L +R+G Y+G D + I + +K P K L D
Sbjct: 91 SKFEVRGYPTLKLFRNGKPQEYNGGRDHDSIIAWLKKKTGPVAKPLAD 138
Score = 30.3 bits (65), Expect = 2.9
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 647 VKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRLHAVWESVGATL--KSRINVAR 820
VK L K FE + + T + V FY C C++L W+ +G I +A+
Sbjct: 309 VKILVGKNFEQVARD----NTKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAK 364
Query: 821 IDASLAGVNTAK 856
+D++L V K
Sbjct: 365 MDSTLNEVEDVK 376
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 34.7 bits (76), Expect = 0.13
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Frame = +2
Query: 353 DELLELIXXKXKLIVLFTKQNCETCKKLEQHVESLQEDFKKHLNAMSV----KTVNSHLA 520
D E+I ++V F C CK L K+ + + + TV+ ++
Sbjct: 31 DNFDEVINGNEFILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVS 90
Query: 521 RLYNPSKEPALIFYRHGVALLYSGEADENEIYGFFEKNQTPAVKELTD 664
+ P L +R+G Y+G D + I + +K P K L D
Sbjct: 91 SKFEVRGYPTLKLFRNGKPQEYNGGRDHDSIIAWLKKKTGPVAKPLAD 138
Score = 30.3 bits (65), Expect = 2.9
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 647 VKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRLHAVWESVGATL--KSRINVAR 820
VK L K FE + + T + V FY C C++L W+ +G I +A+
Sbjct: 243 VKILVGKNFEQVARD----NTKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAK 298
Query: 821 IDASLAGVNTAK 856
+D++L V K
Sbjct: 299 MDSTLNEVEDVK 310
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.13
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Frame = +2
Query: 353 DELLELIXXKXKLIVLFTKQNCETCKKLEQHVESLQEDFKKHLNAMSV----KTVNSHLA 520
D E+I ++V F C CK L K+ + + + TV+ ++
Sbjct: 31 DNFDEVINGNEFILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVS 90
Query: 521 RLYNPSKEPALIFYRHGVALLYSGEADENEIYGFFEKNQTPAVKELTD 664
+ P L +R+G Y+G D + I + +K P K L D
Sbjct: 91 SKFEVRGYPTLKLFRNGKPQEYNGGRDHDSIIAWLKKKTGPVAKPLAD 138
Score = 30.3 bits (65), Expect = 2.9
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 647 VKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRLHAVWESVGATL--KSRINVAR 820
VK L K FE + + T + V FY C C++L W+ +G I +A+
Sbjct: 365 VKILVGKNFEQVARD----NTKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAK 420
Query: 821 IDASLAGVNTAK 856
+D++L V K
Sbjct: 421 MDSTLNEVEDVK 432
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 34.3 bits (75), Expect = 0.18
Identities = 14/67 (20%), Positives = 27/67 (40%)
Frame = +2
Query: 716 WFVMFYGAACVECQRLHAVWESVGATLKSRINVARIDASLAGVNTAKRFHVGKXPAFLLF 895
WF+ FY C C +L W ++ I V ++ + + V P+ + +
Sbjct: 137 WFINFYSTYCSHCHQLAPTWRKFAREIEGTIRVGAVNCA-EDPQLCQSQRVNAYPSLVFY 195
Query: 896 RLGKVYR 916
G+ Y+
Sbjct: 196 PTGEFYQ 202
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 611 IYGFFEKNQTPAVKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRL 763
I F + + P+V E++ + FE L T W V F+ C CQ+L
Sbjct: 539 ILEFLDNSLNPSVMEMSPEQFEELVMNRKDEET--WLVDFFAPWCGPCQQL 587
Score = 29.9 bits (64), Expect = 3.8
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 716 WFVMFYGAACVECQRLHAVWESVGATLKSRINVARID 826
W V F+ C C + +++ + L ++N A+ID
Sbjct: 690 WIVDFFAPWCGHCIQFAPIYDQIAKELAGKVNFAKID 726
>AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical
protein F14F9.3 protein.
Length = 848
Score = 33.9 bits (74), Expect = 0.23
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 796 KEQNKCCSH*CKFSWCQHC*KISCW 870
K QN+ C C +SWC+HC K+ W
Sbjct: 588 KTQNRSCP--CGYSWCRHCNKVPHW 610
>AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-like
protein DPY-11 protein.
Length = 246
Score = 31.5 bits (68), Expect = 1.2
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = +2
Query: 380 KXKLIVLFTKQNCETCKKLEQHVESL---QEDFKKHLNAMSVKTVNSHLARLYNPSKEPA 550
K + ++ F C CK L++ + +D + + V TVN L+ + + P
Sbjct: 39 KGEWMIEFHAPWCPACKDLQKAWNAFADWSDDLGIKVGEVDV-TVNPGLSGRFLVTALPT 97
Query: 551 LIFYRHGVALLYSGEADENEIYGFFEKNQTPAVKELTD 664
+ + GV YSG D+N+ F E + + + D
Sbjct: 98 IYHVKDGVFRQYSGARDKNDFISFVEDKKYRVIDPVPD 135
>AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 11 protein.
Length = 246
Score = 31.5 bits (68), Expect = 1.2
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = +2
Query: 380 KXKLIVLFTKQNCETCKKLEQHVESL---QEDFKKHLNAMSVKTVNSHLARLYNPSKEPA 550
K + ++ F C CK L++ + +D + + V TVN L+ + + P
Sbjct: 39 KGEWMIEFHAPWCPACKDLQKAWNAFADWSDDLGIKVGEVDV-TVNPGLSGRFLVTALPT 97
Query: 551 LIFYRHGVALLYSGEADENEIYGFFEKNQTPAVKELTD 664
+ + GV YSG D+N+ F E + + + D
Sbjct: 98 IYHVKDGVFRQYSGARDKNDFISFVEDKKYRVIDPVPD 135
>AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical
protein W01B11.3 protein.
Length = 487
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 350 DDELLELIXXKXKLIVLFTKQNCETCKKLEQHVESLQEDFKKHLNAMSVKTVNSHLARL- 526
D +L LI K L + E + + H+E L + K+ +NAM++ +S LAR
Sbjct: 90 DAKLGNLIKEKLSLNCVHDSSINELMRGVRAHIEDLLAEHKEEMNAMNLAVAHS-LARYK 148
Query: 527 --YNPSKEPALI 556
+NP K +I
Sbjct: 149 VKFNPEKIDTMI 160
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 30.7 bits (66), Expect = 2.2
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -1
Query: 944 DFTSFLASHICTLCPGETEGMLAIFQHEIF*QC*HQLNLHQCEQHLFCS-LMLLQHFPKQ 768
D +S + + +L G L IF+ I QC H L L C Q LF S L H +
Sbjct: 93 DASSTESDDLSSLPVGVCPHCLQIFEQPISLQCGHSLCLICCNQLLFSSPPALTSHLNRP 152
Query: 767 HVAFGIQHKLP 735
GI ++P
Sbjct: 153 IPRMGISQRVP 163
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 611 IYGFFEKNQTPAVKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRL 763
I F + + P+V E++ + FE L T W V F+ C CQ+L
Sbjct: 69 ILEFLDNSLNPSVMEMSPEQFEELVMNRKDEET--WLVDFFAPWCGPCQQL 117
Score = 29.9 bits (64), Expect = 3.8
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 716 WFVMFYGAACVECQRLHAVWESVGATLKSRINVARID 826
W V F+ C C + +++ + L ++N A+ID
Sbjct: 220 WIVDFFAPWCGHCIQFAPIYDQIAKELAGKVNFAKID 256
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 29.5 bits (63), Expect = 5.0
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 722 VMFYGAA-CVECQRLHAVWESVGATLKSRINVARIDASLAGVNTAKRFHVGKXPAFLL 892
++F+ A+ C CQ + E + A K R+++ +ID + + + P FLL
Sbjct: 24 ILFFTASWCGPCQMIKPRVEELAAEHKDRLSILKIDVDECD-GVGEEYEINSMPTFLL 80
>AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical
protein Y73B6BL.12 protein.
Length = 228
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 716 WFVMFYGAACVECQRLHAVWESVGATLKSRINVARID 826
W V F+ C C + +++ + L ++N A+ID
Sbjct: 130 WIVDFFAPWCGHCIQFAPIYDRIAKELAGKVNFAKID 166
>U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2a protein.
Length = 393
Score = 29.1 bits (62), Expect = 6.6
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Frame = +2
Query: 647 VKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRLHAVWESVGATLKS----RINV 814
V LT + FE QA FV FY C Q L ++ K +I
Sbjct: 19 VVSLTSQNFEQTIQANELV-----FVNFYADWCRFSQMLKPIFLEASEKFKDAAPGKIMW 73
Query: 815 ARIDASLAGVNTAKRFHVGKXPAFLLFRLGK 907
A +DA + A ++HV K P LFR G+
Sbjct: 74 ASVDADKNN-DIATKYHVNKYPTLKLFRNGE 103
>U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2b protein.
Length = 393
Score = 29.1 bits (62), Expect = 6.6
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Frame = +2
Query: 647 VKELTDKIFEHLTQAATGATTGDWFVMFYGAACVECQRLHAVWESVGATLKS----RINV 814
V LT + FE QA FV FY C Q L ++ K +I
Sbjct: 19 VVSLTSQNFEQTIQANELV-----FVNFYADWCRFSQMLKPIFLEASEKFKDAAPGKIMW 73
Query: 815 ARIDASLAGVNTAKRFHVGKXPAFLLFRLGK 907
A +DA + A ++HV K P LFR G+
Sbjct: 74 ASVDADKNN-DIATKYHVNKYPTLKLFRNGE 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,980,618
Number of Sequences: 27780
Number of extensions: 385552
Number of successful extensions: 1039
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3328592102
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -