Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P14
         (1201 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    25   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   6.0  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 475 LPAADRASCVPDDSTIQGTPSSH 407
           LP   RA  + D+S I GTP  H
Sbjct: 297 LPTFGRAWAMDDESDINGTPPLH 319


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 492 HFVRCVFRLPTELRVFRTIVPYKGHHHLTVIGIFPE 385
           +F R     PT      ++ P K   +L V+  FPE
Sbjct: 300 YFCRAFIIFPTHFYCAFSLYPLKSTFYLNVVRPFPE 335


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 462 TELRVFRTIVPYKGHHHL 409
           T LR+++T++  K H H+
Sbjct: 76  THLRIYQTLLSGKNHPHI 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,153
Number of Sequences: 336
Number of extensions: 4864
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34938740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)