Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P13
         (1221 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.36 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.48 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   1.5  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   4.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   5.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 28.7 bits (61), Expect = 0.36
 Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
 Frame = +2

Query: 911  PPXGXGGPFXKXP-RXXFPXPGGXPPPPXGGXXXXPPXXPPXGXP 1042
            PP   G P    P +   P PGG  P P G      P  PP   P
Sbjct: 194  PPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVP 238


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.48
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = -3

Query: 607 PKTXGXGFXXGG-GGGGPXXXXPXPXGGGG 521
           P   G G   G  GGGG     P P GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 25.4 bits (53), Expect = 3.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 589 GFXXGGGGGGPXXXXPXPXGGGG 521
           G   GGGGG      P   GGGG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGG 231


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = +2

Query: 968  PGGXPPPPXGGXXXXPPXXPPXGXPXGXXXXXXPP 1072
            P   PPPP  G    PP  P  G P G      PP
Sbjct: 582  PPAPPPPPPMG----PPPSPLAGGPLGGPAGSRPP 612



 Score = 25.0 bits (52), Expect = 4.5
 Identities = 12/37 (32%), Positives = 12/37 (32%)
 Frame = +2

Query: 932  PFXKXPRXXFPXPGGXPPPPXGGXXXXPPXXPPXGXP 1042
            PF          P G P  P       PP  PP G P
Sbjct: 558  PFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPP 594


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = -1

Query: 369 PPFFXGXPXXPXXFFXXGGPXPPPXGGXPP 280
           P    G P  P       GP PPP  G  P
Sbjct: 89  PGMIPGMPGAPPLLMGPNGPLPPPMMGMRP 118


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 607 PKTXGXGFXXGGGGGGP 557
           P   G G   GGGGGGP
Sbjct: 10  PLRAGGGGGGGGGGGGP 26


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -3

Query: 610 PPKTXGXGFXXGGGGGGPXXXXPXPXGGG 524
           P  T G G   GGG GGP        GGG
Sbjct: 833 PSDTIGAG---GGGAGGPLRGSSGGAGGG 858


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.157    0.552 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,584
Number of Sequences: 2352
Number of extensions: 13770
Number of successful extensions: 79
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138973980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)