Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_P12
(1223 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 103 9e-21
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 95 3e-18
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 75 4e-12
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 5e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 5e-07
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.003
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.006
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.025
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.075
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.13
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 40 0.17
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 35 4.9
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 8.6
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 8.6
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 8.6
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 103 bits (247), Expect = 9e-21
Identities = 61/104 (58%), Positives = 66/104 (63%)
Frame = +2
Query: 617 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 796
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 797 GTVKRPRCWRFSIGSAPLTSITKIDAQVXGGETRQDYKDTRRFP 928
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFP 117
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 95.1 bits (226), Expect = 3e-18
Identities = 59/124 (47%), Positives = 62/124 (50%)
Frame = +2
Query: 785 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVXGGETRQDYKDTRRFPPWKLPRALSCSD 964
SK+ T R RFSIGSAPLTSITKIDAQV GGETRQDYKDTRRF P + P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRF-PLEAPSCALLFR 60
Query: 965 PAXYGIXVRXFSLREAWXFLXXHPXRXLXSGXGRXLQXGLVXXTPRXXXTGGPYXVTXXX 1144
P FSLREAW FL H + V P T PY VT
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAV-GISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVL 119
Query: 1145 XPXR 1156
P R
Sbjct: 120 SPTR 123
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 74.9 bits (176), Expect = 4e-12
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +2
Query: 803 VKRPRCWRFSIGSAPLTSITKIDAQVXGGETRQDYKDTRRFP 928
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFP
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFP 85
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 5e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 793 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 680
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 5e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 760
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.003
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 396 DPDMIRYIDEFGQTTTRMQ 452
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.006
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 712 HSKAVIRLSTESGDNAGKNM 771
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 42.3 bits (95), Expect = 0.025
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 692 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 865
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 866 IDAQVXGGETRQDYKDTRRFP 928
I Q +T+ +YK T FP
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFP 102
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.075
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 591 SALMNRPTRGERRFAYW 641
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.13
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 663 ERGSGRAPNTQTASPRALADSLMQ 592
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p06146;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_pCKO3p06146 - Citrobacter koseri ATCC BAA-895
Length = 125
Score = 39.5 bits (88), Expect = 0.17
Identities = 35/94 (37%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = +2
Query: 878 VXGGETRQDYKDTRRFPPWKLPRALSCSDPAXYGIXVRXFSLREAWXFLXXHPXRXLXSG 1057
V GETRQD K LP ALSCS+PA I V FSL A H S
Sbjct: 23 VRSGETRQDLKIIT-VSDESLPLALSCSNPAVSRIPVPPFSL--AGSVALSHSSHSGISA 79
Query: 1058 XGRXLQXG-LVXXTPRXXXTGGPYXVTXXXXPXR 1156
R V P T PY VT P R
Sbjct: 80 RCRSFAPSWAVSKNPPFSPTAAPYPVTVHLSPTR 113
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 34.7 bits (76), Expect = 4.9
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 945 VRSPVPTLPXTGYXSAXSPFG 1007
+RSPVPTLP TGY SA P G
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSG 21
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 8.6
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 802 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 680
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 8.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 474 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 641
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 8.6
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 554 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 390
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,004,119,832
Number of Sequences: 1657284
Number of extensions: 18800460
Number of successful extensions: 50151
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 47792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50137
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 124011183115
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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