Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P12
         (1223 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   2.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   2.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   2.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   2.7  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   4.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   4.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   4.7  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   6.1  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   6.1  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   8.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   8.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   8.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   8.1  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 133 WLTSSKALGLGIIICHPGC 77
           WL  +    +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 133 WLTSSKALGLGIIICHPGC 77
           WL  +    +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 133 WLTSSKALGLGIIICHPGC 77
           WL  +    +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 133 WLTSSKALGLGIIICHPGC 77
           WL  +    +G ++C PGC
Sbjct: 786 WLQKATEHVIGCVLCSPGC 804


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -2

Query: 133 WLTSSKALGLGIIICHPGC 77
           W+  +    +G ++C PGC
Sbjct: 212 WMQKATEHVIGCVLCSPGC 230


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -2

Query: 133 WLTSSKALGLGIIICHPGC 77
           W+  +    +G ++C PGC
Sbjct: 526 WMQKATEHVIGCVLCSPGC 544


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -2

Query: 133 WLTSSKALGLGIIICHPGC 77
           W+  +    +G ++C PGC
Sbjct: 759 WMQKATEHVIGCVLCSPGC 777


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -2

Query: 133 WLTSSKALGLGIIICHPGC 77
           W+  +    +G ++C PGC
Sbjct: 759 WMQKATEHVIGCVLCSPGC 777


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 456 KKCFICEICDAIALFVTIISCNKQVN 533
           K C +C+  + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 479 NFTNKAFFSLH 447
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 479 NFTNKAFFSLH 447
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 288 LWVGPRGFCSLCSKSRTWFQSSRRAC 211
           L+V P  F S C    TWF    + C
Sbjct: 117 LYVPPGIFKSTCKMDITWFPFDDQHC 142


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 288 LWVGPRGFCSLCSKSRTWFQSSRRAC 211
           L+V P  F S C    TWF    + C
Sbjct: 117 LYVPPGIFKSTCKMDITWFPFDDQHC 142


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 288 LWVGPRGFCSLCSKSRTWFQSSRRAC 211
           L+V P  F S C    TWF    + C
Sbjct: 117 LYVPPGIFKSTCKMDITWFPFDDQHC 142


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 288 LWVGPRGFCSLCSKSRTWFQSSRRAC 211
           L+V P  F S C    TWF    + C
Sbjct: 117 LYVPPGIFKSTCKMDITWFPFDDQHC 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,339
Number of Sequences: 336
Number of extensions: 4641
Number of successful extensions: 28
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35760828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)