Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P12
         (1223 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278...    31   1.8  
06_01_0185 - 1437693-1437834,1437969-1438078,1438214-1438264,143...    30   4.3  
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828...    29   5.6  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   9.8  

>05_01_0356 +
           2785410-2785670,2785843-2785960,2786800-2786891,
           2787114-2787176,2787299-2787397,2787726-2787884,
           2788420-2788491,2788567-2788699,2788813-2788877,
           2789016-2789091,2789236-2789337,2789524-2789716,
           2790576-2790654,2792939-2793007,2793261-2793311,
           2793680-2793742,2793926-2794041,2794263-2794347,
           2794898-2794957,2795594-2795639,2796011-2796084,
           2796350-2796400,2796474-2796674,2796747-2796791,
           2797063-2797156,2797226-2797371,2797510-2797739,
           2798136-2798196,2798290-2798347,2799020-2799513
          Length = 1151

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -1

Query: 275 REVSVLFVQSHELGSSRHGELVSAGT--RRHGDRSCCLASHHQRDCHAVVVDLFQ 117
           +E S++F Q+   G    G+ + A     R+ +  CC+ASH  +    + +DL Q
Sbjct: 624 KEFSLIFSQAPNRGGKAPGDSLDAQRWWNRYVEAQCCIASHDYKGGLDIYLDLMQ 678


>06_01_0185 -
           1437693-1437834,1437969-1438078,1438214-1438264,
           1438877-1439122,1439244-1439315,1439614-1439648,
           1439755-1439845,1440546-1440610,1440733-1440813,
           1441020-1441137,1441535-1441627,1441865-1441997,
           1442471-1442503,1443264-1443343,1443444-1443549,
           1443621-1443795,1443884-1443980,1444819-1445251,
           1445329-1445459,1446052-1446341,1446429-1447002
          Length = 1051

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 871 RSSXRWRNPTGL*RYQAFSPLEAPSCAL 954
           RS  RWR+   +  + AF    APSCAL
Sbjct: 321 RSRRRWRHAAAISSFSAFVAENAPSCAL 348


>07_03_1483 +
           26881032-26882035,26882130-26882204,26882324-26882861,
           26883999-26884895,26885178-26885327,26885459-26885791,
           26886501-26886695,26887805-26887918
          Length = 1101

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = -2

Query: 136 LWLT-SSKALGLGIIICHPGCN 74
           LWL  +S ++G G IICH GC+
Sbjct: 336 LWLVQNSNSIGQGYIICHLGCH 357


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 650 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 805
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,156,523
Number of Sequences: 37544
Number of extensions: 561538
Number of successful extensions: 1582
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3759607596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)