Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P10
         (1179 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0789 + 20569738-20570207,20573425-20573464,20573484-205735...    35   0.14 
02_02_0579 + 11755361-11755545,11755695-11755763,11755904-11756420     30   3.1  
01_05_0535 - 23001864-23005052                                         29   7.1  

>10_08_0789 +
           20569738-20570207,20573425-20573464,20573484-20573536,
           20573633-20574212,20574323-20575384,20575631-20575813,
           20576112-20576199,20576285-20576532,20576712-20577053,
           20579026-20579163,20579521-20579547
          Length = 1076

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -2

Query: 338 RSKTGMSSACLVTRTPPV---SPRARSPTPGETLRPRDDDGSEG 216
           R+++  SS     RTPP    SPR R P  GE++   D DG EG
Sbjct: 72  RTRSRRSSCSRAARTPPSGARSPRRRRPGAGESVAIADGDGCEG 115


>02_02_0579 + 11755361-11755545,11755695-11755763,11755904-11756420
          Length = 256

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = -2

Query: 377 PNRLPGKSRLTLFRSKTGMSSACLVTRTPPVSPRARSPTPGETLRPRDDDGS 222
           P+RLPG SR     ++   S     TRT P S  AR+        P  D  S
Sbjct: 97  PSRLPGLSRAATKSARRHSSITRFYTRTAPPSDAARTAISSPAALPATDAAS 148


>01_05_0535 - 23001864-23005052
          Length = 1062

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = -2

Query: 371 RLPGKSRLTLFRSKTGMSSACLVTRTPPVSPRARSPTP 258
           +LP    LTL RS +  SSA      PP  PR R P P
Sbjct: 4   KLPPLPPLTLRRSSSSSSSAAAAASPPPPPPR-RLPPP 40


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,433,778
Number of Sequences: 37544
Number of extensions: 288470
Number of successful extensions: 1029
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3608253564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)