BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_P10
(1179 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 25 4.3
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 24 7.5
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
cell-adhesion protein protein.
Length = 1881
Score = 25.0 bits (52), Expect = 4.3
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 277 RGETGGVRVT--RQADDIPVFDRNKVSLDFPGSLFGPSVSLLIRTTKIIGDVVQNSAVRY 450
R T +RV Q D+ P F + +D P ++ +V L ++ T + VRY
Sbjct: 494 RTSTAQIRVVVLDQNDNFPEFSQPVYDIDVPENVIAGTVLLQLQATDSDSGLFGTEGVRY 553
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 24.2 bits (50), Expect = 7.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 378 TKQAPREVEADLVPVE 331
T+QAPRE A L PV+
Sbjct: 1458 TEQAPREATAQLPPVQ 1473
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,032
Number of Sequences: 2352
Number of extensions: 10874
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 133251522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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