Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P09
         (1187 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   7.8  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 398 CTKSNSGTNYKEKEKVYYANE---ECDKRRGKF 487
           C+   S +N  +   + + NE   ECDK RG+F
Sbjct: 224 CSMKFSDSNQLKAHVLIHTNEKPFECDKCRGRF 256


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 565 FVRYPASRYKVFKLILNLCYLIALQHQQVKYV 660
           ++    S+YK  +L++ LC    L H+  K +
Sbjct: 195 YIEESISKYKHAELVMPLCKSCDLHHRLSKLI 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,497
Number of Sequences: 336
Number of extensions: 4406
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34527696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)