Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P09
         (1187 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405...    44   2e-04
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914...    29   7.2  

>05_07_0079 -
           27539389-27539892,27540059-27540343,27540453-27540550,
           27540951-27541042,27541155-27541259,27541360-27541567,
           27542469-27542472,27542742-27542765,27545025-27546266
          Length = 853

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 26/103 (25%), Positives = 43/103 (41%)
 Frame = +3

Query: 624 PNSTAASTGEICLIVPDMKKGRRFDHEPTIDHWEELLRKSGVTQVKTILPLRQVKVEYDQ 803
           P      +  IC+I  D  K R       +D       +S    V  ++PL  ++ +Y  
Sbjct: 72  PVIVPGESASICVISDDRPKSRSPAASDLLD-----ASRSHHLPVSEVIPLSALRTDYRP 126

Query: 804 FELKRKLLXQHDFIMVDTRILSHASHLLGKMFFKKHNMLIPVD 932
           +E +R+L   HD  + D  +L     +LGK F+      + VD
Sbjct: 127 YESRRRLAASHDLFIADRAVLPLLPRVLGKAFYSTKKAPVAVD 169


>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
            10791796-10791903,10793133-10797686,10798347-10798461,
            10799597-10799724,10799843-10800043,10800158-10800227,
            10801233-10801314,10801433-10801556,10801761-10801778
          Length = 1960

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 377  SIKTEKLCTKSNSGTNYKEKEKVYYANEECDKRRGK 484
            SI TE  CTK N     +EK+K+    +EC + R +
Sbjct: 1624 SIVTELECTKLNFDCCMEEKQKIEDTLQECTEERNR 1659


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,293,026
Number of Sequences: 37544
Number of extensions: 399479
Number of successful extensions: 720
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3619931772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)