Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P09
         (1187 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_24692| Best HMM Match : Disintegrin (HMM E-Value=7.6e-23)           31   1.8  
SB_59554| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.1  

>SB_24692| Best HMM Match : Disintegrin (HMM E-Value=7.6e-23)
          Length = 1592

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +2

Query: 377  SIKTEKLC---TKSNSGTNYKEKEKVYYANEECDKRRGKFLF 493
            SI+  +LC    KS SG +  +  K+ Y + +CD R   FL+
Sbjct: 1299 SIRNGRLCIKPVKSGSGCSVSDGTKLVYTDSQCDGRDAVFLY 1340


>SB_59554| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1247

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = +3

Query: 678 KKGRRFDHEPTIDHWEELLRKSGVTQVKTILPLRQVKVE 794
           K+ RR+  EP+  +W + L  +G+++V  +L  R++  E
Sbjct: 221 KESRRWLSEPSYGYWPQQLNFAGISKVSRVLYTRRILYE 259


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,942,463
Number of Sequences: 59808
Number of extensions: 511640
Number of successful extensions: 906
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 3669048935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)