Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P04
         (1167 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q928S3 Cluster: Lin2459 protein; n=1; Listeria innocua|...    38   0.38 
UniRef50_Q196Z9 Cluster: Putative uncharacterized protein; n=1; ...    36   2.7  
UniRef50_Q16RP7 Cluster: Sodium/chloride dependent transporter; ...    35   4.6  

>UniRef50_Q928S3 Cluster: Lin2459 protein; n=1; Listeria
           innocua|Rep: Lin2459 protein - Listeria innocua
          Length = 433

 Score = 38.3 bits (85), Expect = 0.38
 Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
 Frame = +3

Query: 696 QRLIWWLDKRNEQILKPIWITDAYEQ-NTNLAAIL-GYCLGTMLMKTGRKLGFAVLAVSQ 869
           Q+L+WW       ++ P+W++ A++  + N AA+  G  L +ML+ T   +   V     
Sbjct: 232 QQLLWWFGIHGYSVMAPVWLSVAFQNVDANAAALAKGEPLSSMLIFTPDFMWSIVGVTGA 291

Query: 870 GI---IMIIILYTSTKEVS-----VYIKHYFALNEAXM 959
           G+   +++I++++ +K          I  +F++NE  M
Sbjct: 292 GVTGALVVIMMFSKSKRYKTLGRLALIPTFFSINEPVM 329


>UniRef50_Q196Z9 Cluster: Putative uncharacterized protein; n=1;
           Aedes taeniorhynchus iridescent virus|Rep: Putative
           uncharacterized protein - Aedes taeniorhynchus
           iridescent virus
          Length = 488

 Score = 35.5 bits (78), Expect = 2.7
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = +2

Query: 755 HGCLRTKHEL-SCDIRILFGNDANENRKKT--WIRCLSSFPGDYYDN-YFIHIDQRGQRL 922
           H C +    L +CDI  L+GN ++E +KK   WI+ L    GDY  N   +H+D     +
Sbjct: 223 HQCPQLNFRLEACDI--LYGNGSDEVKKKAKRWIKTLLPDGGDYVQNPENVHLDSVANSV 280

Query: 923 HQTL 934
            +TL
Sbjct: 281 DETL 284


>UniRef50_Q16RP7 Cluster: Sodium/chloride dependent transporter; n=2;
            Aedes aegypti|Rep: Sodium/chloride dependent transporter
            - Aedes aegypti (Yellowfever mosquito)
          Length = 801

 Score = 34.7 bits (76), Expect = 4.6
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +3

Query: 840  LGFAVLAVSQGIIMIIILYTSTKEVSVYIKHYFALNEAXMVVLTAGLL-GEYIHP 1001
            LG+A+L +S  + M I +YTST+ +  +  +   L  A +VV  AGLL   YI P
Sbjct: 376  LGYALLFISSIVSMTIYIYTSTRMIRKHPNYTVCL--AGLVVAIAGLLCPNYIFP 428


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,030,765,350
Number of Sequences: 1657284
Number of extensions: 20217587
Number of successful extensions: 41039
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41027
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 116285896298
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)