Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P04
         (1167 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    28   0.16 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    25   1.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   4.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   4.4  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 27.9 bits (59), Expect = 0.16
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +3

Query: 234 SKRFSIFNKVSGANTQRAYYTSVVLFKQLYLPVCI*LVDRRVRVFSYLVFLAFYFIL 404
           SK  + FN++ G      +  S ++  Q+   +C+ LV     V+ +LV+++F  I+
Sbjct: 230 SKLVTRFNEIFGLGLLLMFAVSFLIITQVIFVICV-LVQSEKIVWLHLVYISFLGII 285


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 950 SGYGCTHRW 976
           +GYGC HRW
Sbjct: 375 NGYGCEHRW 383


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 389 VLFYFIVENFV*LLKHFGATIHVNYTSY 472
           +L YFI+  +V  +     T+HV + SY
Sbjct: 40  ILKYFIIAIYVLTILTSSVTLHVCFNSY 67


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
 Frame = +3

Query: 690 IWQRLIWWLDKRNEQILKPIWITDAYEQNTNLAAILGYCLGTMLMKTGRKLGFAVLAVSQ 869
           I+  L+W +  + E  L    +  A     N +++L   +GTM    G  +     +VS 
Sbjct: 248 IYVALVWGVKDQAEFTLSGQVMKYAALATENFSSLLEPAVGTMTGAGGTAIVSISTSVST 307

Query: 870 GIIMIII---LYTSTKEVSVYIKHYFALNEAXMVV 965
            + + I+   L+T      V I    +L+E   ++
Sbjct: 308 SVYLAIVFNGLFTEEDVADVPINVTLSLDEKKYIL 342



 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 848 RCLSSFPGDYYDNYFI 895
           RC  + PGD YD+  I
Sbjct: 103 RCCKTCPGDLYDSDII 118


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
            candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 10/43 (23%), Positives = 24/43 (55%)
 Frame = +3

Query: 876  IMIIILYTSTKEVSVYIKHYFALNEAXMVVLTAGLLGEYIHPN 1004
            +++ ++YT T+  SVY + Y   + + + ++   LL   ++ N
Sbjct: 37   VLMFLIYTITEIYSVYERRYMNAHLSGIQLVVRNLLDISLYLN 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,378
Number of Sequences: 336
Number of extensions: 5870
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34022010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)