Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P04
         (1167 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0719 + 24580765-24581090,24581285-24581401,24582739-245828...    32   0.76 
02_04_0622 - 24508508-24508666,24509533-24509634,24510108-245101...    30   4.0  

>01_05_0719 +
           24580765-24581090,24581285-24581401,24582739-24582866,
           24582938-24583036,24583126-24583284,24584113-24584199,
           24584324-24584415,24584570-24584644,24585257-24585424
          Length = 416

 Score = 32.3 bits (70), Expect = 0.76
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 81  SSHHLKRFQFESFLKVPSFAIXSLGALLRTYR 176
           ++ HLK+  FE+ LK PSF   +  A+  TYR
Sbjct: 197 AAEHLKKHLFENLLKHPSFITDTKSAISETYR 228


>02_04_0622 - 24508508-24508666,24509533-24509634,24510108-24510176,
            24510294-24510362,24510428-24510502,24510584-24510688,
            24511309-24511407,24511521-24513230,24513489-24513788,
            24514748-24514846,24514962-24515079,24515166-24515251,
            24515334-24515402,24515746-24515843,24516373-24516534,
            24516779-24516787,24516970-24516991,24517620-24517712,
            24517872-24517940,24518720-24518782,24518882-24519037,
            24520895-24521230
          Length = 1355

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = -3

Query: 865  ETAKTANPSFLPVFISIVPKQYPNIAAKFVFCS*ASVIHMGFSICSFL--LSSHQINLCH 692
            E   T  PSFLP        Q P++    VFC     I +G +   +L  L+S Q+ L  
Sbjct: 1277 EELMTQLPSFLPALFDAFNNQSPDVRKTVVFCLVDIYIMLGKAFVPYLEGLNSTQLRLVT 1336

Query: 691  I 689
            I
Sbjct: 1337 I 1337


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,725,284
Number of Sequences: 37544
Number of extensions: 517688
Number of successful extensions: 1090
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3561544780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)