Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P04
         (1167 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    26   2.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   3.2  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    25   4.2  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   5.6  

>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 25.8 bits (54), Expect = 2.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 161 LTHLSSKSXFDFVGPRFESKFYLT 232
           +T +  K+ FDF+  RFES+  +T
Sbjct: 255 VTDMMQKALFDFLKHRFESRIIIT 278


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 3.2
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -1

Query: 843 QVFFRFSLASFPNSILISQLSSCFVRRHP*SIWVSVFARFSCPATRLIFAIFRILKSV 670
           +VF  F   + P S  I  L    VR H    WV      +  ATR++ A+ R++ ++
Sbjct: 790 EVFITFGGVNVPFSRSIKYLG---VRVHAHLSWVPHVKEITLKATRIVHAVNRLMPNL 844


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 25.0 bits (52), Expect = 4.2
 Identities = 22/91 (24%), Positives = 30/91 (32%)
 Frame = +2

Query: 659 FRVTTLFNIRNMAKINLVAGQEKRANTETHMDHGCLRTKHELSCDIRILFGNDANENRKK 838
           F  +   NIRN   +       + A    H      R      C    L   D  E R +
Sbjct: 131 FTKSECVNIRNNFHLPKSNRNCRTAARRNHSSRNTCRRNCYQQCIYEELEAVDGLEIRVE 190

Query: 839 TWIRCLSSFPGDYYDNYFIHIDQRGQRLHQT 931
                   FP DY     + ID+  +RL +T
Sbjct: 191 KLYALAEGFPADYRHAVHLAIDECVKRLRKT 221


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 24.6 bits (51), Expect = 5.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 873 IIMIIILYTSTKEVSVYIKH 932
           I ++ I  TS K VSVY++H
Sbjct: 570 ITLLFIFETSIKLVSVYVRH 589


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,122,993
Number of Sequences: 2352
Number of extensions: 23951
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 131616534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)