Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P04
         (1167 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   1.7  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   3.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   5.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   5.2  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   5.2  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   9.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   9.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   9.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   9.0  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 645 FRVVLSVLLHSLIFGIWQRLIWW 713
           F V+ +VLL  LIF    R  WW
Sbjct: 8   FEVIAAVLLTILIFVTSHRPAWW 30


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +2

Query: 728 RANTETHMDHGCLRTKHELSCDIRIL--FGNDANENRKKTWIRCLSSFPGDYYDNYFIHI 901
           R   ET  +    RT+ E S + +I+    N+ N N         +     YY NY I+I
Sbjct: 290 RKYRETSKERSRDRTERERSKERKIISSLSNNYNYNNNNYKYNYNNYNKKLYYKNYIINI 349

Query: 902 DQ 907
           +Q
Sbjct: 350 EQ 351


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 969  TAGLLGEYIHPNXRAGWY 1022
            T+G   EYI P   +GWY
Sbjct: 192  TSGKYKEYIIPANYSGWY 209


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 969  TAGLLGEYIHPNXRAGWY 1022
            T+G   EYI P   +GWY
Sbjct: 192  TSGKYKEYIIPANYSGWY 209


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 514 VLYWTPYGIVN 546
           VL WTPYG+++
Sbjct: 284 VLSWTPYGVMS 294


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 872 DYYDNYFIHIDQRGQRLHQTLLR 940
           DY +NY   IDQ   ++  T+LR
Sbjct: 60  DYKNNYPSDIDQWHDKIFVTMLR 82


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +2

Query: 791 DIRILFGNDANENRKKTWIRCLSSFPGDYYD 883
           D R+    D     + TW +     PGDY D
Sbjct: 695 DARVECKADGFPKPQVTWKKAAGDTPGDYTD 725


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 872 DYYDNYFIHIDQRGQRLHQTLLR 940
           DY +NY   IDQ   ++  T+LR
Sbjct: 60  DYKNNYPSDIDQWHDKIFVTMLR 82


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 872 DYYDNYFIHIDQRGQRLHQTLLR 940
           DY +NY   IDQ   ++  T+LR
Sbjct: 60  DYKNNYPSDIDQWHDKIFVTMLR 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,192
Number of Sequences: 438
Number of extensions: 6632
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 39644829
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)