Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P02
         (1215 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    26   1.9  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   3.4  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   5.9  

>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 575 RRHASAARNVLPPRRRNCCRPSLEKTKPR 661
           R HASA +    PR R+ C  +   T+ R
Sbjct: 67  RMHASARKRAYCPRTRSACAETFPSTRRR 95


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 26   PXDPGFLXCALDLTVSG*VPSSCRRGLQPLLCDVVKR 136
            P D   +    +LT+   VP+ C  G Q  +C ++K+
Sbjct: 1096 PQDMSEVQATAELTIHRYVPARCGAGCQDRVCILLKK 1132


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +1

Query: 124  CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKP 237
            CG K++ +DP    E+        +R+M K+ ++ K+P
Sbjct: 1179 CGSKQLDIDP---QEVVGGAGACGVRRMAKEKMLRKRP 1213


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,610
Number of Sequences: 2352
Number of extensions: 15768
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138156486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)