Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_P01
         (1146 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   0.81 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.3  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   7.6  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   7.6  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   7.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.4 bits (53), Expect = 0.81
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = +2

Query: 305 CSEGNVGFPTCHCDYDLNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVD 484
           C +GN       C+ + +   GSD +T D           +P + +L    C+++   + 
Sbjct: 124 CGDGNCIERGLFCNGEKDCSDGSDENTCDIDNDPNRAPPCDPAVCVLPDCFCSEDGTTIP 183

Query: 485 G--PSK 496
           G  PSK
Sbjct: 184 GDLPSK 189


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 536 CGSDGITYNNDCLLNCATINDSRLGIEYYGPCADKVIVVDP 658
           C S+GI  +     NCA     R G+ Y+  CA+  ++ DP
Sbjct: 560 CRSEGIFSDPK---NCAAYYVCRSGLSYHLSCAEN-MMFDP 596


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 803 LTKSHKTLVELFEIITFTNPQS 868
           L+  +K  V+LF + TF  P+S
Sbjct: 177 LSDRYKVFVDLFNLSTFLIPRS 198


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 803 LTKSHKTLVELFEIITFTNPQS 868
           L+  +K  V+LF + TF  P+S
Sbjct: 337 LSDRYKVFVDLFNLSTFLIPRS 358


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 803 LTKSHKTLVELFEIITFTNPQS 868
           L+  +K  V+LF + TF  P+S
Sbjct: 337 LSDRYKVFVDLFNLSTFLIPRS 358


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,858
Number of Sequences: 336
Number of extensions: 4663
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33300331
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)