Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_P01
(1146 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 67 2e-11
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 67 2e-11
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 60 4e-09
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 45 1e-04
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 29 6.2
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 29 6.2
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 29 6.2
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 67.3 bits (157), Expect = 2e-11
Identities = 56/186 (30%), Positives = 78/186 (41%), Gaps = 38/186 (20%)
Frame = +2
Query: 188 CYRNQRPVCGTDGKTYNNECLLDCAT-RDDPGLRVRYQG-------PCSEGNVGF-PTC- 337
C N VCGTDGKTY NEC L A ++ + V +G PC + GF +C
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 382
Query: 338 -------------HCDYDLNQVCGSDNHTYDXXXXXXXXXX-TNPGLSILYSGLCA---- 463
C+ + VC ++ T+D T + + + G C
Sbjct: 383 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 442
Query: 464 ---DEVK------IVDGPSKYPSCTCTREMKPVCGSDGITYNNDC-LLNCATINDSRLGI 613
D K +VDG K +CT E K VCGSDG TY+N+C L N A + + +
Sbjct: 443 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 502
Query: 614 EYYGPC 631
+Y C
Sbjct: 503 KYNSAC 508
Score = 53.6 bits (123), Expect = 3e-07
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 42/190 (22%)
Frame = +2
Query: 188 CYRNQRPVCGTDGKTYNNECLL---DCATRDDPGLRVRYQGPCSEGNV------------ 322
C RPVC T+G+T++NEC + C T+ ++V++QG C G
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVC 454
Query: 323 ----GFPTC---HCDYDLNQVCGSDNHTY-DXXXXXXXXXXTNPGLSILYSGLC-ADEVK 475
G P C C + +VCGSD TY + + + Y+ C A ++K
Sbjct: 455 VVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLK 514
Query: 476 ---------IVDGPSKYPSCTCT--------REMKPVCGSDGITYNNDCLLNCATINDSR 604
V G ++ C C E K VCG+DG+TY+++C + + + S+
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574
Query: 605 LGI-EYYGPC 631
+ + G C
Sbjct: 575 FVMTAFEGKC 584
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 500 PSCTCTREMKPVCGSDGITYNNDCLLNCATINDSR 604
P+C + P+CGSDGI YNN C LN + D R
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQR 717
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 149 QVIATLAYPPSC---ACYRNQRPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPC 307
QV + P C +C + VCG+DGKTY+NEC L + A + V+Y C
Sbjct: 452 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSAC 508
Score = 35.9 bits (79), Expect = 0.054
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 173 PPSCACYRNQ--RPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPCSE 313
P C Y + + VCGTDG TY++EC + A + ++G C E
Sbjct: 537 PDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDE 586
Score = 35.9 bits (79), Expect = 0.054
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 10/56 (17%)
Frame = +2
Query: 458 CADEVKIVDGPSKYPSCTCTREMK----------PVCGSDGITYNNDCLLNCATIN 595
C K V PS +P C C + VCGSDG TY+N C L N
Sbjct: 845 CFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFACN 900
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +2
Query: 485 GPSKYPSCTC----TREMKPVCGSDGITYNNDCLLNCATINDSR 604
G + P C C T VCG+DG TY N+C L A + +
Sbjct: 310 GVDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQK 353
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 176 PSCACYRNQRPVCGTDGKTYNNECLLD-CATRDDPGLRV 289
P+C N P+CG+DG YNN+C L+ + RD + V
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQREIHV 721
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 67.3 bits (157), Expect = 2e-11
Identities = 56/186 (30%), Positives = 78/186 (41%), Gaps = 38/186 (20%)
Frame = +2
Query: 188 CYRNQRPVCGTDGKTYNNECLLDCAT-RDDPGLRVRYQG-------PCSEGNVGF-PTC- 337
C N VCGTDGKTY NEC L A ++ + V +G PC + GF +C
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 390
Query: 338 -------------HCDYDLNQVCGSDNHTYDXXXXXXXXXX-TNPGLSILYSGLCA---- 463
C+ + VC ++ T+D T + + + G C
Sbjct: 391 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 450
Query: 464 ---DEVK------IVDGPSKYPSCTCTREMKPVCGSDGITYNNDC-LLNCATINDSRLGI 613
D K +VDG K +CT E K VCGSDG TY+N+C L N A + + +
Sbjct: 451 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 510
Query: 614 EYYGPC 631
+Y C
Sbjct: 511 KYNSAC 516
Score = 53.6 bits (123), Expect = 3e-07
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 42/190 (22%)
Frame = +2
Query: 188 CYRNQRPVCGTDGKTYNNECLL---DCATRDDPGLRVRYQGPCSEGNV------------ 322
C RPVC T+G+T++NEC + C T+ ++V++QG C G
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVC 462
Query: 323 ----GFPTC---HCDYDLNQVCGSDNHTY-DXXXXXXXXXXTNPGLSILYSGLC-ADEVK 475
G P C C + +VCGSD TY + + + Y+ C A ++K
Sbjct: 463 VVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLK 522
Query: 476 ---------IVDGPSKYPSCTCT--------REMKPVCGSDGITYNNDCLLNCATINDSR 604
V G ++ C C E K VCG+DG+TY+++C + + + S+
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582
Query: 605 LGI-EYYGPC 631
+ + G C
Sbjct: 583 FVMTAFEGKC 592
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 149 QVIATLAYPPSC---ACYRNQRPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPC 307
QV + P C +C + VCG+DGKTY+NEC L + A + V+Y C
Sbjct: 460 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSAC 516
Score = 35.9 bits (79), Expect = 0.054
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 173 PPSCACYRNQ--RPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPCSE 313
P C Y + + VCGTDG TY++EC + A + ++G C E
Sbjct: 545 PDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDE 594
Score = 35.1 bits (77), Expect = 0.094
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 10/50 (20%)
Frame = +2
Query: 458 CADEVKIVDGPSKYPSCTCTREMK----------PVCGSDGITYNNDCLL 577
C K V PS +P C C + VCGSDG TY+N C L
Sbjct: 784 CFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCEL 833
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +2
Query: 485 GPSKYPSCTC----TREMKPVCGSDGITYNNDCLLNCATINDSR 604
G + P C C T VCG+DG TY N+C L A + +
Sbjct: 318 GVDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQK 361
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 59.7 bits (138), Expect = 4e-09
Identities = 44/138 (31%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +2
Query: 173 PPSCACYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSE----GNVGFPTCH 340
PP C C RPVCGTD TYNN C L C R + L Y G C + VG P C
Sbjct: 16 PPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKKECEKVGTPICD 75
Query: 341 CDYDLNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTR 520
+ + +D H + L+ L+ G C+ + +CT T
Sbjct: 76 ---NFGETHINDCHFAQFQCIMKKSMGLS--LTKLHMGRCSSK-------DCNHNCTNT- 122
Query: 521 EMKPVCGSDGITYNNDCL 574
E PVC ++G Y N C+
Sbjct: 123 EFDPVCDTNGSVYRNLCV 140
Score = 54.8 bits (126), Expect = 1e-07
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +2
Query: 470 VKIVDGPSKYPSCTCTREMKPVCGSDGITYNNDCLLNCATINDSRLGIEYYGPCADK 640
+ + G S P C C ++PVCG+D +TYNN C L C + L Y G C DK
Sbjct: 7 ILLFTGFSPPPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDK 63
Score = 45.2 bits (102), Expect = 9e-05
Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 2/136 (1%)
Frame = +2
Query: 179 SCACYRNQRPVCGTDGKTYNNECLL--DCATRDDPGLRVRYQGPCSEGNVGFPTCHCDYD 352
S C + P+CGT+G T+ N C L + + + V Y G C + N C D
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN-------CPSD 821
Query: 353 LNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKP 532
+ VC S T+ L D+ ++ + K + C +E P
Sbjct: 822 FSPVCDSKGSTHQNICHFGVKRCI--AERTFGDVLTIDKFEVCN-EVKECNNACPKEYSP 878
Query: 533 VCGSDGITYNNDCLLN 580
VC S+G N+C L+
Sbjct: 879 VCASNGQNIVNECELD 894
Score = 42.3 bits (95), Expect = 6e-04
Identities = 46/155 (29%), Positives = 59/155 (38%), Gaps = 13/155 (8%)
Frame = +2
Query: 206 PVCGTDGKTYNNECLLD---C--ATRDDPGLRVRYQGPCSEGNVGFPTCHCDYDLNQVC- 367
PVC T+G T+ N CL+D C ++ ++V YQG C CD D VC
Sbjct: 931 PVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCNQ-------PCDEDKTPVCD 983
Query: 368 GSDNH--TYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKPVCG 541
G+ H N LSI YSG C P C VC
Sbjct: 984 GTITHPNICRFRIAQCEAERVNKTLSIAYSGECC----------LLPKGEC-ESSGAVCD 1032
Query: 542 SDGITYNNDCLLN-----CATINDSRLGIEYYGPC 631
S+G T+ N C+ TI+ L I + G C
Sbjct: 1033 SEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC 1067
Score = 41.5 bits (93), Expect = 0.001
Identities = 37/138 (26%), Positives = 52/138 (37%), Gaps = 7/138 (5%)
Frame = +2
Query: 188 CYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSE---GNVGFPTCHCDYDLN 358
C ++ P+C +D TY N C D L V ++G CSE P + D +
Sbjct: 590 CTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSP-DES 648
Query: 359 QVCGSDNHTYDXXXXXXXXXXTNPG----LSILYSGLCADEVKIVDGPSKYPSCTCTREM 526
VC D T G L++ Y G+C V+ D T +
Sbjct: 649 FVCLEDQSTKSLCEYQMLSCIFERGYGVNLTVQYIGVCCPPVESCD----------TEKP 698
Query: 527 KPVCGSDGITYNNDCLLN 580
PVC G T+ +C LN
Sbjct: 699 DPVCTDSGATFLTECELN 716
Score = 37.1 bits (82), Expect = 0.023
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 503 SCTCTREMKPVCGSDGITYNNDCLLN---CATINDSRLGIEYYGPCAD 637
S C P+CG++G+T+ N C L C + N S + + Y G C D
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESAN-STIEVAYTGMCCD 815
Score = 36.3 bits (80), Expect = 0.041
Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 15/163 (9%)
Frame = +2
Query: 188 CYRNQRPVCGTDGKTYNNEC---LLDCATRDDPG--LRVRYQGPCSEGNVGFPTCHCDYD 352
C ++ PVC T +T+ N C C G + + + G C TC D
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEK 316
Query: 353 LNQVCGSDNHTYDXXXXXXXXXXT-----NPGLSILYSGLCADEVKIVDGPSKYPSCTCT 517
+C + N T+ + +++ C + + TC+
Sbjct: 317 KIPICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCS 376
Query: 518 REMKPVCGSDGITYNNDCLLNCATINDSRLGI-----EYYGPC 631
R++KPVC T+ N C N +LGI Y PC
Sbjct: 377 RDVKPVCDEANNTHQNLCHFQQYNCNMRKLGIRSPYLRYLRPC 419
Score = 35.5 bits (78), Expect = 0.071
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 512 CTREMKPVCGSDGITYNNDCLLNCATINDSRLGIEYYGPCAD 637
CT + P+C SD TY N C DS L + + G C++
Sbjct: 590 CTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE 631
Score = 33.9 bits (74), Expect = 0.22
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 2/112 (1%)
Frame = +2
Query: 176 PSCACYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPTCH--CDY 349
P C + +PVC + G + N C + + E + C C
Sbjct: 533 PKPNCPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTD 592
Query: 350 DLNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPS 505
D + +C SD TY+ + L +L+ G C++ +D P P+
Sbjct: 593 DKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE---CLDSPCALPA 641
Score = 32.7 bits (71), Expect = 0.50
Identities = 40/163 (24%), Positives = 59/163 (36%), Gaps = 30/163 (18%)
Frame = +2
Query: 173 PPSCACYRNQR-PVCGTDGKTYNNECLL---DCATR--DDPGLRVRYQGPCSEG------ 316
PP +C + PVC G T+ EC L +C + D P L V QG C +
Sbjct: 688 PPVESCDTEKPDPVCTDSGATFLTECELNIENCKLKKLDQPKLVVVSQGICEKDMLTDDF 747
Query: 317 ---------NVGFP-------TCHCDYDLNQVCGSDNHTYD--XXXXXXXXXXTNPGLSI 442
N+ F + CD + +CG++ T+ N + +
Sbjct: 748 SSNRNFQKPNIEFKRENTFNCSMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEV 807
Query: 443 LYSGLCADEVKIVDGPSKYPSCTCTREMKPVCGSDGITYNNDC 571
Y+G+C D C + PVC S G T+ N C
Sbjct: 808 AYTGMCCD-------------TNCPSDFSPVCDSKGSTHQNIC 837
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Frame = +2
Query: 185 ACYRNQRPVCGTDGKT-------YNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPTCHC 343
+C + +PVC + G+T +N++C+ D + L + YQG C C
Sbjct: 1072 SCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCCPAG-------C 1124
Query: 344 DYDLNQVCGSDNHTY 388
+L+ +C + Y
Sbjct: 1125 TDELSVICDQHENIY 1139
Score = 29.1 bits (62), Expect = 6.2
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 17/165 (10%)
Frame = +2
Query: 188 CYRNQRPVCGTDGK-TYNNEC---LLDC-ATRDDPGLRVRYQGPCSEGNVGFPTCHCDYD 352
C ++ PVC DG T+ N C + C A R + L + Y G C P C+
Sbjct: 974 CDEDKTPVC--DGTITHPNICRFRIAQCEAERVNKTLSIAYSGECCL----LPKGECESS 1027
Query: 353 LNQVCGSD-----NHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCT 517
VC S+ NH + L+I+++G C +C
Sbjct: 1028 -GAVCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECC------------ALASCP 1074
Query: 518 REMKPVCGSDGIT-------YNNDCLLNCATINDSRLGIEYYGPC 631
+ +PVC S G T +N+ C+ + ++ L ++Y G C
Sbjct: 1075 KTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKC 1119
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 44.8 bits (101), Expect = 1e-04
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 10/163 (6%)
Frame = +2
Query: 179 SCACYRNQRPVCGTDGK---TYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPTCHCDY 349
+C+C PVC +G TY+N+C+ CA + L + Y+G C +C+
Sbjct: 24 TCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR------YCNM 77
Query: 350 DLNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCT--CTRE 523
VC S+ Y + L + + +D + SCT C E
Sbjct: 78 FEQPVC-SEGQMYQTVCEFEER-------QCIEFKLFKNHIS-MDSSQEKCSCTAPCPTE 128
Query: 524 MKPVCGSDGITYNNDC-LLNCATINDSRLG----IEYYGPCAD 637
PVC G T+ N C LN + ++L ++Y G C +
Sbjct: 129 WNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCE 171
Score = 31.1 bits (67), Expect = 1.5
Identities = 41/175 (23%), Positives = 62/175 (35%), Gaps = 16/175 (9%)
Frame = +2
Query: 164 LAYPPSCA----CYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFP 331
L Y SC C ++PVC ++G+ Y C + + L + S
Sbjct: 63 LLYEGSCCSARYCNMFEQPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSC 121
Query: 332 TCHCDYDLNQVCGSDNHTYDXXXXXXXXXX-----TNPGLSILYSGLCADEVKIVDGPSK 496
T C + N VC T+ N L + YSG+C +++
Sbjct: 122 TAPCPTEWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCEDM-------- 173
Query: 497 YPSCTCTREMKPVCGSDGITYNNDC---LLNCAT----INDSRLGIEYYGPCADK 640
C+ + VC S+G T+ + C + C I RL I GPC K
Sbjct: 174 ---CSAGQTSLTVCDSEGNTHTDICSFYIAKCRQMRRGIGKKRLQIAGVGPCKPK 225
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 440 ILYSGLCADEVKIVDGPS---KYPSCTCTREMKPVCGSDGITYNNDCLLNCATIN 595
I + L A + +V+G S K SC C +++P C TY +C+ N
Sbjct: 4 IAIAALLASSLLLVEGTSIRDKRQSCGCAPKIQPSCSCQRTTYTQPQQYSCSCQN 58
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 440 ILYSGLCADEVKIVDGPS---KYPSCTCTREMKPVCGSDGITYNNDCLLNCATIN 595
I + L A + +V+G S K SC C +++P C TY +C+ N
Sbjct: 4 IAIAALLASSLLLVEGTSIRDKRQSCGCAPKVQPSCSCQRTTYTQPQQYSCSCQN 58
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 440 ILYSGLCADEVKIVDGPS---KYPSCTCTREMKPVCGSDGITYNNDCLLNCATIN 595
I + L A + +V+G S K SC C +++P C TY +C+ N
Sbjct: 4 IAIAALLASSLLLVEGTSIRDKRQSCGCAPKIQPSCSCQRTTYTQPQQYSCSCQN 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,296,827
Number of Sequences: 27780
Number of extensions: 445748
Number of successful extensions: 1067
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3109468484
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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