Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_O22
         (1194 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   2.4  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           30   3.1  
12_02_0299 - 17051570-17052474,17053542-17053755                       30   4.1  
09_02_0543 + 10427321-10428315,10428440-10429154                       29   5.5  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 14/47 (29%), Positives = 16/47 (34%)
 Frame = -1

Query: 1050 PPXPXFXXSGPXXPXXPXXFPXXSPXXXXTPXPPLGXAXPXXPXRXP 910
            PP P    + P  P  P   P   P     P PP     P  P + P
Sbjct: 316  PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP 362


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/60 (28%), Positives = 18/60 (30%)
 Frame = -2

Query: 968 GXPXFPPLGXLXXXPPXXXRGXXVXXRGXGXAPHXPTXSPRAXAXXXXXXKPPXPPPXPG 789
           G P  PP       PP           G G  P  P  +P A         PP PP   G
Sbjct: 319 GAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAG 378


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/47 (36%), Positives = 17/47 (36%)
 Frame = -1

Query: 1050 PPXPXFXXSGPXXPXXPXXFPXXSPXXXXTPXPPLGXAXPXXPXRXP 910
            PP P F  S P  P  P   P   P     P PPL    P  P   P
Sbjct: 311  PPLPSFYPSPPPPPPPPPPPPPSFPW----PFPPLAPLFPPYPSPPP 353


>09_02_0543 + 10427321-10428315,10428440-10429154
          Length = 569

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 23/88 (26%), Positives = 24/88 (27%), Gaps = 4/88 (4%)
 Frame = -2

Query: 1049 PPXRXXXXXALXGPLXPXFFXXXPPXXGXPXFPPLGXLXXXPPXXXRGXXVXXRGXGXA- 873
            PP       A   P  P      PP    P  PP       P            G G A 
Sbjct: 15   PPRPTPAPQATPPPAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGPGPAA 74

Query: 872  ---PHXPTXSPRAXAXXXXXXKPPXPPP 798
               PH P+ S            PP PPP
Sbjct: 75   APSPHSPSPSNAPWVAPAADIPPPPPPP 102


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,758,475
Number of Sequences: 37544
Number of extensions: 330770
Number of successful extensions: 1002
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3643211076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)