Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_O20
(1216 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0768 - 22988119-22988223,22988337-22988558,22988645-229888... 195 5e-50
05_03_0079 + 8212648-8212724,8212844-8212993,8213211-8213351,821... 83 3e-16
01_05_0265 + 20188160-20188211,20188291-20189019,20189103-201892... 73 3e-13
11_04_0331 + 16456577-16456579,16456664-16456911,16457625-164578... 63 5e-10
06_01_0809 - 6100025-6100251,6100456-6100565,6100919-6100986,610... 50 5e-06
02_05_1080 - 33955034-33955117,33955199-33955300,33955381-339555... 43 6e-04
05_05_0208 + 23275931-23275996,23276084-23276196,23276279-232764... 37 0.028
03_04_0020 - 16504322-16504654,16504758-16504785,16504937-165049... 30 4.2
12_01_0997 - 10114571-10114864,10115422-10115795,10115910-10116144 29 5.6
04_03_0550 + 17054155-17054182,17054438-17054503,17054504-17056959 29 5.6
10_07_0194 - 13957709-13957925,13960065-13960129,13960281-139604... 29 7.4
08_01_0554 - 4851698-4851943,4852041-4852760 29 7.4
04_03_0934 - 20912932-20912997,20913131-20913172,20913477-209138... 29 7.4
>12_02_0768 - 22988119-22988223,22988337-22988558,22988645-22988810,
22989176-22989181,22989281-22989453,22989737-22989928,
22990034-22990211,22990302-22990444,22990666-22990755,
22990869-22990991,22991391-22991568,22992213-22992442,
22992557-22992616,22992731-22992798,22992908-22992953
Length = 659
Score = 195 bits (476), Expect = 5e-50
Identities = 95/182 (52%), Positives = 121/182 (66%)
Frame = +3
Query: 468 DPRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVA 647
DP R PPE+ R FEVY K S + IR+VKA +IG+LV + GIVTRC+DVKPL+ VA
Sbjct: 122 DPLQRMPPEIRRFFEVYIKAFSKVTPLTIRQVKASNIGQLVKISGIVTRCSDVKPLMQVA 181
Query: 648 TYSCSACGAETYQPVRALQFTPPPACTADDCRLNKTAGQLHLQTRGSRFQKFQELKIQEH 827
Y+C CG E YQ V A F P C + C+LNK G L LQ R S+F KFQE+K+QE
Sbjct: 182 VYTCEECGFEIYQEVTARVFMPLFECPSQRCKLNKAKGNLILQLRASKFLKFQEVKLQEL 241
Query: 828 SDQVPVGHIPRQLSVYCRGETTRRAQPGXHVAITGLFLXLHNVGFRQIMQGWLSDTYLEX 1007
++ VP GHIPR L+V+ RGE TR+ PG V ++G+FL + GFR + G ++DTYLE
Sbjct: 242 AEHVPKGHIPRSLTVHLRGELTRKVAPGDVVEMSGIFLPMPYYGFRAMRAGLVADTYLES 301
Query: 1008 HS 1013
S
Sbjct: 302 MS 303
>05_03_0079 +
8212648-8212724,8212844-8212993,8213211-8213351,
8213658-8213820,8213901-8214094,8214174-8214369,
8214462-8214539,8214933-8215162,8215574-8215688,
8215878-8215952,8216032-8216172,8216309-8216512,
8216586-8216747,8216787-8216794,8217099-8217223,
8217316-8217438,8218177-8218307,8218527-8218658
Length = 814
Score = 83.4 bits (197), Expect = 3e-16
Identities = 45/135 (33%), Positives = 72/135 (53%)
Frame = +3
Query: 552 IREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVRALQFTPPPACTA 731
+RE+ IGKL V G+VTR ++V+P L+ T+ C CG + ++T P C
Sbjct: 124 LRELGTAEIGKLTAVMGVVTRTSEVRPELLQGTFKCLDCGNVVKNVEQQFKYTEPIICVN 183
Query: 732 DDCRLNKTAGQLHLQTRGSRFQKFQELKIQEHSDQVPVGHIPRQLSVYCRGETTRRAQPG 911
C+ N++ L Q S+F +Q +++QE S ++P G +PR L V R E +A+ G
Sbjct: 184 ATCQ-NRSKWALLRQE--SKFTDWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEKARAG 240
Query: 912 XHVAITGLFLXLHNV 956
V TG + + +V
Sbjct: 241 DTVIFTGTVVAVPDV 255
>01_05_0265 +
20188160-20188211,20188291-20189019,20189103-20189231,
20189857-20189938,20190034-20190166,20190269-20190340,
20190478-20190573,20190651-20190764,20190838-20191050,
20191144-20191242,20191328-20191488,20191589-20191685,
20191828-20191989,20192068-20192148,20192242-20192320,
20192414-20192550,20192638-20192688,20192776-20192844,
20193583-20193700,20194142-20194197
Length = 909
Score = 73.3 bits (172), Expect = 3e-13
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Frame = +3
Query: 492 ELIRRFEVYF-KDLST-----SKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATY 653
+L+ R E F K + T SV +R + I K+V+++G++ RC+ V P L A +
Sbjct: 228 DLVARIEPLFEKHIQTRIYNLKSSVCLRNLNPSDIEKMVSIKGMIIRCSSVIPELKEAVF 287
Query: 654 SCSACGAETYQPVRALQ--FTPPPACTADDCRLNKTAGQLHLQTRGSRFQKFQELKIQEH 827
C CG + +PV + T P C + C+ + +H + R F Q +K+QE
Sbjct: 288 RCLVCGFYS-EPVMVDRGRVTEPHICQKEQCKATNSMTLVHNRCR---FADKQIIKLQET 343
Query: 828 SDQVPVGHIPRQLSVYCRGETTRRAQPGXHVAITGLF 938
D++P G P +SV + +PG V ITG++
Sbjct: 344 PDEIPEGGTPHTVSVLMHDKLVDAGKPGDRVEITGIY 380
>11_04_0331 +
16456577-16456579,16456664-16456911,16457625-16457812,
16458293-16458489,16458579-16458768,16458865-16459084,
16459169-16459376,16459508-16459642,16459725-16459916,
16459999-16460171,16460266-16460454,16460539-16460655,
16460734-16460818,16460900-16461052,16461135-16461260,
16461391-16461573,16461823-16461984,16462098-16462214
Length = 961
Score = 62.9 bits (146), Expect = 5e-10
Identities = 33/129 (25%), Positives = 61/129 (47%)
Frame = +3
Query: 552 IREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVRALQFTPPPACTA 731
IR ++ H+ ++ + G+VTR + V P L + CS CG P +T +
Sbjct: 345 IRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKFDCSKCGT-VLGPFFQNSYTEVKVGSC 403
Query: 732 DDCRLNKTAGQLHLQTRGSRFQKFQELKIQEHSDQVPVGHIPRQLSVYCRGETTRRAQPG 911
+C+ + G + + ++ +Q+L +QE VP G +PR V + A+PG
Sbjct: 404 PECQ---SKGPFTINVEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPG 460
Query: 912 XHVAITGLF 938
+ +TG++
Sbjct: 461 EEIEVTGIY 469
>06_01_0809 -
6100025-6100251,6100456-6100565,6100919-6100986,
6101108-6101229,6101446-6101527,6101629-6101695,
6102811-6102883,6103032-6103148,6104167-6104259,
6104430-6104495,6105121-6105218,6105917-6106016,
6106486-6106660,6106828-6106894,6107574-6107712,
6107830-6107926,6107992-6108130,6108212-6108363
Length = 663
Score = 49.6 bits (113), Expect = 5e-06
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 3/133 (2%)
Frame = +3
Query: 543 SVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAE-TYQPVRAL--QFTP 713
S I +V+ +H G L+T++G V R VK + Y C C T P + T
Sbjct: 132 SPSIGKVRVKHRGTLLTLKGTVIRSGGVKMIEGERKYQCRKCKCRFTVHPELEAGNRITL 191
Query: 714 PPACTADDCRLNKTAGQLHLQTRGSRFQKFQELKIQEHSDQVPVGHIPRQLSVYCRGETT 893
P +C + + L +QE+KIQE+ + VG IPR + + +
Sbjct: 192 PASCKSKSAK-GCGGANFQLIEDSITCHDYQEIKIQENIQLLGVGSIPRSMPIILMDDLV 250
Query: 894 RRAQPGXHVAITG 932
+ G V +TG
Sbjct: 251 DIVKAGDDVVVTG 263
>02_05_1080 -
33955034-33955117,33955199-33955300,33955381-33955510,
33955674-33955783,33955827-33955950,33956042-33956136,
33956205-33956300,33956419-33956551,33956668-33956759,
33956844-33956948,33957201-33957335,33957421-33957526,
33957621-33957748,33957860-33957958,33958049-33958228,
33958303-33958446,33958533-33958647,33958739-33958905
Length = 714
Score = 42.7 bits (96), Expect = 6e-04
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Frame = +3
Query: 531 STSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVR----- 695
S + +R + A+++ KLV + GI + VK T C C + P R
Sbjct: 131 SKENCLSMRSIGADYMSKLVKIAGITIAASRVKAKATHVTLLCKNCRSVKTVPCRPGLGG 190
Query: 696 -----ALQFTPPPACTADDCRLNKTAGQLHLQTRGSRFQKFQELKIQEHSDQVPVGHIPR 860
+ P P + C L+ S++ Q LK+QE+ + VP G +PR
Sbjct: 191 AIVPRSCDHVPQPG--EEPCPLDPWIAV----PDKSKYVDLQTLKLQENPEDVPTGELPR 244
Query: 861 QLSVYCRGETTRRAQPGXHVAITGLF 938
+ + + PG + + G++
Sbjct: 245 NMLLSVDRHLVQTIVPGTRLTVIGIY 270
>05_05_0208 +
23275931-23275996,23276084-23276196,23276279-23276459,
23276590-23276674,23276974-23277104,23277194-23277432,
23277512-23277748,23277838-23277992,23278039-23278271,
23278359-23278521,23278613-23278818,23278960-23279019,
23279106-23279198,23279406-23279569,23280070-23280138,
23280241-23280382,23280490-23280546
Length = 797
Score = 37.1 bits (82), Expect = 0.028
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +3
Query: 588 VTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVRAL-QFTPPPACTADDCRLNKTAGQ 764
+TV+ + + + V+P +V + + C A G + R + F P + R ++
Sbjct: 140 ITVQSVSSDGSLVRPKVVKSVHYCPATGGTLSREYRDITSFVGLPTGSVYPTR-DENGNL 198
Query: 765 LHLQTRGSRFQKFQELKIQEHSDQVPVGHIPRQLSVYCRGETTRRAQPGXHVAITGLFLX 944
L + ++ Q L +QE + G +PR + + + +PG V+I G++
Sbjct: 199 LVTEYGMCEYKDHQTLSMQEVPENSAPGQLPRTVDIIVEDDLVDSCKPGDRVSIVGVYKA 258
Query: 945 L 947
L
Sbjct: 259 L 259
>03_04_0020 -
16504322-16504654,16504758-16504785,16504937-16504989,
16505377-16505463,16505636-16505704,16506071-16506145,
16507040-16507210,16507693-16507793,16508062-16508139,
16508492-16508648,16508737-16509006,16509369-16509485,
16510250-16510339,16510417-16510629,16510742-16510891,
16511929-16512342
Length = 801
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +2
Query: 164 LSNCCCRXXVFXICXXTSSSCTQRXARI---XSCLGCFXCAACSFXXG 298
L++CCC C + C ++ SCL CF C CS G
Sbjct: 753 LTDCCCCMCFINTCSKMNDRCAIVMVQLCGALSCLACFEC--CSLCCG 798
>12_01_0997 - 10114571-10114864,10115422-10115795,10115910-10116144
Length = 300
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 574 CSALTSLIGTLFDVDKSLKYTSNLLMSSGGYLFLGSLIXPGILWFLAS-NIILCSMYT 404
C+ L L L K + T +++ G+ FLG + GIL LAS N ++C +YT
Sbjct: 21 CNILPRLPFKLTTRLKVISSTPDIVGIPSGFDFLGCCLENGILSLLASTNGLVCILYT 78
>04_03_0550 + 17054155-17054182,17054438-17054503,17054504-17056959
Length = 849
Score = 29.5 bits (63), Expect = 5.6
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 769 CSCPAVLLRRQSSAVQAGGGVNCSARTGWYVSAPHALH-EYVATTSSGFTSVHRVTIPRT 593
CSC A + +V G +N + G Y++A + LH AT + R T
Sbjct: 438 CSCTAYSYQNSRCSVWHGKLLNVNKNDGIYINADNVLHLRLAATDFQDLSKNKRKTNVEL 497
Query: 592 VTSFPICSALTSLI 551
V I S + +LI
Sbjct: 498 VVGASIVSFVLALI 511
>10_07_0194 -
13957709-13957925,13960065-13960129,13960281-13960454,
13960847-13960889,13961081-13961225,13961305-13961413,
13961694-13961822,13961935-13962031,13962639-13962703,
13963275-13963439
Length = 402
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 703 CSARTGWYVSAPHALHEYVATTSSGFTSVHRVTIPRTVT 587
C A T + PH +H++++ +S F I R +T
Sbjct: 208 CQAATQIFYVPPHGIHQFLSDAASSFGDSRSCVIAREIT 246
>08_01_0554 - 4851698-4851943,4852041-4852760
Length = 321
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 755 RRTAASADQGL*VPEVPGA*DTGALRPSPGGPH 853
R+TAA GL + GA ALRP+P PH
Sbjct: 205 RKTAAPPFAGLVAADEHGARTDKALRPAPSAPH 237
>04_03_0934 -
20912932-20912997,20913131-20913172,20913477-20913845,
20913949-20914080
Length = 202
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 830 RPSP-GGPHPAPAVRVLPRGDD 892
RP+P G P PAPA+ LP DD
Sbjct: 68 RPAPFGAPAPAPAIPPLPGSDD 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,626,844
Number of Sequences: 37544
Number of extensions: 450272
Number of successful extensions: 1463
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3724688640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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