Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_O20
(1216 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm (li... 201 9e-52
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 85 1e-16
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 85 1e-16
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 85 1e-16
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 66 5e-11
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 59 5e-09
Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical pr... 58 9e-09
Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical pr... 49 6e-06
Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical p... 31 2.2
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 29 8.8
>AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 7 protein.
Length = 730
Score = 201 bits (490), Expect = 9e-52
Identities = 104/246 (42%), Positives = 146/246 (59%), Gaps = 5/246 (2%)
Frame = +3
Query: 288 LXXAVKQNPSSXTXXVSAVVYXMLPDYKF-KXVVAKXSLDVYIEHRIMLE----ARNHRI 452
L A+ N + M+ DY K +LD Y+ R+ ++ A N +
Sbjct: 71 LSEAITSNTKRYEVLFKDTISDMIQDYLGDKQAPVIDALDAYMFQRLHMDRNEGAANEEV 130
Query: 453 PGXMRDPRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKP 632
++D R +YPP+L++RFEVYF + +R +KA IG LV+++G+V R T+VKP
Sbjct: 131 S--LQDKRKKYPPQLLQRFEVYFTTDDAAHETCVRNIKATEIGHLVSMKGVVIRATEVKP 188
Query: 633 LLVVATYSCSACGAETYQPVRALQFTPPPACTADDCRLNKTAGQLHLQTRGSRFQKFQEL 812
+ V TY+C C AE YQPV+ +QFTPP C +C K G+LH+Q RGS+F KFQEL
Sbjct: 189 CVEVMTYTCDTCAAEVYQPVKGMQFTPPVNCPNKECVEAKANGRLHMQLRGSKFVKFQEL 248
Query: 813 KIQEHSDQVPVGHIPRQLSVYCRGETTRRAQPGXHVAITGLFLXLHNVGFRQIMQGWLSD 992
KIQE S+QVPVG IPR ++V+ GE TR+ G V ++G+FL + GFR G ++D
Sbjct: 249 KIQELSEQVPVGSIPRTMTVHVYGEMTRKCNTGNVVHVSGVFLPIMQSGFRP-TGGLVAD 307
Query: 993 TYLEXH 1010
TYLE H
Sbjct: 308 TYLEAH 313
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/149 (30%), Positives = 71/149 (47%)
Frame = +3
Query: 510 EVYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQP 689
++Y + +RE+ A+ +G LV + G + R V P L A + C CG T
Sbjct: 108 QLYVSLFNLDAKTKVRELSADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDCGVTTRDV 167
Query: 690 VRALQFTPPPACTADDCRLNKTAGQLHLQTRGSRFQKFQELKIQEHSDQVPVGHIPRQLS 869
+ ++T P C C +N+T + L S F FQ+++IQE ++P G IPR +
Sbjct: 168 QQQFRYTQPTKCANPQC-MNRT--RFSLDVNSSTFVDFQKIRIQETQAELPRGSIPRTVD 224
Query: 870 VYCRGETTRRAQPGXHVAITGLFLXLHNV 956
V RGE QPG I G + + ++
Sbjct: 225 VIVRGEMVETVQPGDKCDIVGTLIVIPDI 253
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/149 (30%), Positives = 71/149 (47%)
Frame = +3
Query: 510 EVYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQP 689
++Y + +RE+ A+ +G LV + G + R V P L A + C CG T
Sbjct: 108 QLYVSLFNLDAKTKVRELSADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDCGVTTRDV 167
Query: 690 VRALQFTPPPACTADDCRLNKTAGQLHLQTRGSRFQKFQELKIQEHSDQVPVGHIPRQLS 869
+ ++T P C C +N+T + L S F FQ+++IQE ++P G IPR +
Sbjct: 168 QQQFRYTQPTKCANPQC-MNRT--RFSLDVNSSTFVDFQKIRIQETQAELPRGSIPRTVD 224
Query: 870 VYCRGETTRRAQPGXHVAITGLFLXLHNV 956
V RGE QPG I G + + ++
Sbjct: 225 VIVRGEMVETVQPGDKCDIVGTLIVIPDI 253
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/149 (30%), Positives = 71/149 (47%)
Frame = +3
Query: 510 EVYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQP 689
++Y + +RE+ A+ +G LV + G + R V P L A + C CG T
Sbjct: 108 QLYVSLFNLDAKTKVRELSADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDCGVTTRDV 167
Query: 690 VRALQFTPPPACTADDCRLNKTAGQLHLQTRGSRFQKFQELKIQEHSDQVPVGHIPRQLS 869
+ ++T P C C +N+T + L S F FQ+++IQE ++P G IPR +
Sbjct: 168 QQQFRYTQPTKCANPQC-MNRT--RFSLDVNSSTFVDFQKIRIQETQAELPRGSIPRTVD 224
Query: 870 VYCRGETTRRAQPGXHVAITGLFLXLHNV 956
V RGE QPG I G + + ++
Sbjct: 225 VIVRGEMVETVQPGDKCDIVGTLIVIPDI 253
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 66.1 bits (154), Expect = 5e-11
Identities = 40/142 (28%), Positives = 66/142 (46%)
Frame = +3
Query: 513 VYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPV 692
+ + + K+ +R + + +L+T+ G+VTR + + P + + C+ C V
Sbjct: 221 IELRPFNAQKTRNMRGLNPNDVDQLITISGMVTRTSSLIPEMRSGYFQCAVCAFGIESEV 280
Query: 693 RALQFTPPPACTADDCRLNKTAGQLHLQTRGSRFQKFQELKIQEHSDQVPVGHIPRQLSV 872
+ P CT +C N QL + R S F Q +K+QE D +P G P +SV
Sbjct: 281 DKGRIEEPVVCT--NCS-NTHCFQL-VHNR-SVFLDKQVVKLQESPDDMPSGETPHTVSV 335
Query: 873 YCRGETTRRAQPGXHVAITGLF 938
Y G QPG + +TG+F
Sbjct: 336 YAHGSLVESVQPGDRITVTGIF 357
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 59.3 bits (137), Expect = 5e-09
Identities = 33/129 (25%), Positives = 56/129 (43%)
Frame = +3
Query: 552 IREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVRALQFTPPPACTA 731
IR ++ H+ L+ G+VT + + P L V Y C ACG V+ P
Sbjct: 270 IRMLRQVHLNMLIRTAGVVTIASGILPQLAVVKYDCVACGYLLGPFVQQNDEEVRPTI-- 327
Query: 732 DDCRLNKTAGQLHLQTRGSRFQKFQELKIQEHSDQVPVGHIPRQLSVYCRGETTRRAQPG 911
C + G L + + +Q + +QE ++V G +PR V G+ +PG
Sbjct: 328 --CPSCQGKGPFELNVENTVYHNYQRITMQESPNKVAAGRLPRSKDVILLGDLCDSCKPG 385
Query: 912 XHVAITGLF 938
+ +TG++
Sbjct: 386 DEIEVTGVY 394
>Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical
protein C25D7.6 protein.
Length = 812
Score = 58.4 bits (135), Expect = 9e-09
Identities = 37/149 (24%), Positives = 62/149 (41%)
Frame = +3
Query: 507 FEVYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQ 686
F V F+ + V R +K+ ++G LV GIVT+C+ V+ L+ + + C A +
Sbjct: 103 FHVGFEGTFGERHVNPRTLKSSYLGNLVCCEGIVTKCSTVRQKLLTSVHYCPATNKVLEK 162
Query: 687 PVRALQFTPPPACTADDCRLNKTAGQLHLQTRGSRFQKFQELKIQEHSDQVPVGHIPRQL 866
+ ++ L + S ++ Q IQE + P G +PR +
Sbjct: 163 KFADFTMLDTAVTNNNYPTEDENKNPLETEFGHSVYKDHQTFTIQELPESAPAGQLPRAV 222
Query: 867 SVYCRGETTRRAQPGXHVAITGLFLXLHN 953
+ R +PG V I G+F L N
Sbjct: 223 DCVADLDLADRVKPGDRVRIIGVFRVLPN 251
>Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical
protein R10E4.4 protein.
Length = 759
Score = 49.2 bits (112), Expect = 6e-06
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Frame = +3
Query: 552 IREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVR---ALQ-FTPPP 719
+R+VK+ + ++V + GI+ V+ T C C T V L+ F P
Sbjct: 137 LRQVKSAQVSQVVKISGIIVAAAQVRSKATKVTLQCRQC-KHTIPDVSIKPGLEGFALPR 195
Query: 720 ACTA-DDCRLNKTAGQLHLQTRGS-RFQKFQELKIQEHSDQVPVGHIPRQLSVYCRGETT 893
C A ++ + ++ +Q LK+QE+ + VP G +PR L ++ T
Sbjct: 196 TCAAPQQGQMQRCPIDPYIMLPDKCECVDYQTLKLQENPEDVPHGEMPRHLQLFTERYLT 255
Query: 894 RRAQPGXHVAITGLF 938
+ PG V I G++
Sbjct: 256 DKVVPGNRVTIVGVY 270
>Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical
protein F36G9.1 protein.
Length = 356
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -1
Query: 634 SGFTSVHRVTIPRTVTSFPICSALTSLIGTLFDVDKSL-KYTSNLLMSSGGYLFLGSLIX 458
S F SVH +TIPR +C + + + + L + NL SS G L +
Sbjct: 115 SFFVSVHSITIPRIFQKLAVCFGVAMAVLRVIILKYPLNRRGQNLKRSSSGICILLIVCI 174
Query: 457 PGI-LWF 440
P I WF
Sbjct: 175 PHIPFWF 181
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2
Query: 885 PRGSTRTAGAGCGPPGLGRSAPVS*APGTSG 793
P GS G G GPPG P+S PG+SG
Sbjct: 222 PAGSPGRVGRG-GPPGPDGGYPMSGEPGSSG 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,942,725
Number of Sequences: 27780
Number of extensions: 362585
Number of successful extensions: 1164
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3349461018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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