Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_O20
         (1216 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    27   0.44 
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    27   0.44 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   1.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   1.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    24   3.1  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   4.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   7.1  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   9.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   9.4  

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 26.6 bits (56), Expect = 0.44
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 744 LNKTAGQLHLQTRGSR-FQKFQELKIQEHSDQVPVG 848
           L+ + G++     G R F ++  + IQE+ DQV VG
Sbjct: 340 LSGSTGKVAFDDNGDRIFAEYDIINIQENGDQVSVG 375


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.44
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 666 CGAETYQPVRALQFTPPPACTADDCRLNKTAGQLHLQTRGSR 791
           C       VRA      P   A+  +L + AG+ +LQ RG+R
Sbjct: 270 CPTNLGTTVRASVHIKLPKLAANRAKLEEIAGKFNLQVRGTR 311


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 606 VTRCTDVKPLLVVATYSCSACGAETYQPVRALQF 707
           + R  D+ P + +  +    CG +TY   ++L F
Sbjct: 5   INRDEDILPGITIGVHILDTCGRDTYALNQSLHF 38


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 606 VTRCTDVKPLLVVATYSCSACGAETYQPVRALQF 707
           + R  D+ P + +  +    CG +TY   ++L F
Sbjct: 95  INRDEDILPGITIGVHILDTCGRDTYALNQSLHF 128


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
            protein.
          Length = 342

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +3

Query: 879  RGETTRRAQPGXHVAITGLFLXLHNVGFRQIMQGWLSDTYLEXH 1010
            R  TTR      HV+ T +   L  +G+ Q +  W+     E H
Sbjct: 82   RHSTTREIAEKLHVSHTCIENHLKQLGYVQKLDTWVPHELKEKH 125


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -2

Query: 423 FCAQCIHPRXPSLL-PL*ICNQA 358
           FC  CIHP   S+L  L  CN A
Sbjct: 34  FCRNCIHPTVFSVLFWLGYCNSA 56


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -2

Query: 423 FCAQCIHPRXPSLL-PL*ICNQA 358
           FC  CIHP   S+L  L  CN A
Sbjct: 482 FCRNCIHPTVFSVLFWLGYCNSA 504


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 670 PHALHEYVATTSSGFTSVHRVTIPRT 593
           PH       +TSSG   +HR ++ +T
Sbjct: 537 PHRRRANSGSTSSGDDELHRASLSKT 562


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 381 VVAKXSLDVYIEHRIMLEARNHRIPGXMRDPRNRYPPELIRRFEVYFKDLST 536
           ++AK  L  +I + + +      I    R PR    P+LIR+  ++ K L T
Sbjct: 295 LIAKYLLFTFIMNTVSILVTVIIINWNFRGPRTHRMPQLIRK--IFLKYLPT 344


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 11/51 (21%), Positives = 20/51 (39%)
 Frame = -1

Query: 760 PAVLLRRQSSAVQAGGGVNCSARTGWYVSAPHALHEYVATTSSGFTSVHRV 608
           PAV +   S+    GGG         Y     A+ E+     +G+ ++  +
Sbjct: 588 PAVGVAAASAGGAGGGGARSYVDPHTYEDPNQAVREFAREIDAGYITIEAI 638


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,532
Number of Sequences: 438
Number of extensions: 4221
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41572845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)