Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_O16
         (1290 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    33   0.37 
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956...    31   2.6  
03_01_0515 - 3864796-3865425                                           30   4.6  
04_03_0902 + 20707834-20708187                                         29   6.0  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   8.0  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 33.5 bits (73), Expect = 0.37
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = -3

Query: 430 PPXPXXXSXWIXRPXPSPPXPXXVXXHSTPPPSHXXXCTXNH 305
           PP P   +  +  P P PP P  +   S PPP        NH
Sbjct: 589 PPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNH 630



 Score = 29.1 bits (62), Expect = 8.0
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -3

Query: 430 PPXPXXXSXWIXRPXPSPPXPXXVXXHSTPPP 335
           PP P   +  +  P P PP P  +     PPP
Sbjct: 622 PPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPP 653


>04_04_1641 +
           34993807-34994589,34994924-34995022,34995521-34995648,
           34996095-34996235,34996456-34996542,34996627-34996780,
           34998569-34998628,34999019-34999447,34999524-34999819,
           35000278-35000407,35000690-35001187
          Length = 934

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -3

Query: 433 RPPXPXXXSXWIXRPXPSPPXPXXVXXHSTPPPSH 329
           +P  P   +    RP P PP P  V   + PPP H
Sbjct: 22  KPFKPLSSAAPFRRPSPPPPPPSPVPSPAPPPPPH 56


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -3

Query: 430 PPXPXXXSXWIXRPXPSPPXPXXVXXHSTPPPS 332
           PP P   +     P PSPP P  V     PPP+
Sbjct: 89  PPPPPPPAASPPPPPPSPPPPSPVKSSPPPPPA 121


>04_03_0902 + 20707834-20708187
          Length = 117

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 726 PXTPIXAPPXXLPGTXPAXXRTP 794
           P TP+ APP  LP T P    TP
Sbjct: 61  PRTPLYAPPPPLPHTSPTPEPTP 83


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 430  PPXPXXXSXWIXRPXPSPPXPXXVXXHSTPPP 335
            PP P   S  +  P P PP P        PPP
Sbjct: 1169 PPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPP 1200


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,979,932
Number of Sequences: 37544
Number of extensions: 179804
Number of successful extensions: 844
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)