Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_O14
         (1159 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    27   1.0  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    25   4.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   9.7  

>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 27.1 bits (57), Expect = 1.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 782 HKPIQRHYLQQLRRSKQNKQDDQTTYNLP 868
           H+P+Q+  LQQ RR + NK+  +     P
Sbjct: 46  HQPLQQKNLQQQRREQLNKEQHRLARKQP 74


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 25.0 bits (52), Expect = 4.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 523 VVGPSRRRHQQDLCFGI*THANTCRPSP 440
           ++  + + H+ D CFGI TH  TC+  P
Sbjct: 338 ILSLNEQGHKID-CFGIGTHLVTCQRQP 364


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 9.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 460 NTCRPSPKTLVVIYPYRIRLL 398
           N CRP  +T+  +Y  R+ L+
Sbjct: 842 NECRPDAETVAYLYHIRMELI 862


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,038,540
Number of Sequences: 2352
Number of extensions: 20847
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 130390293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)