Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_O12
         (1204 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,426...    33   0.59 
12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356     30   3.2  
11_04_0167 + 14382976-14385244,14389373-14389842                       30   3.2  
02_02_0509 - 11064209-11064470,11065945-11066132,11066249-110664...    30   3.2  
02_01_0176 + 1207792-1208081,1208212-1208329,1208495-1208668,120...    30   4.2  
05_03_0179 - 9257066-9258946                                           29   5.5  
12_02_0643 - 21461123-21461902                                         29   9.6  
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724           29   9.6  

>03_01_0577 +
           4261249-4262055,4262149-4262203,4262293-4262468,
           4262554-4262718,4262811-4263178,4263225-4263861,
           4263952-4265844,4266325-4266672
          Length = 1482

 Score = 32.7 bits (71), Expect = 0.59
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 824 ACGTSVVKVAHQMISSRSPRGSTVASPSEDATAPDPQHYNLMARRGSXS 970
           A G +VV +AH++ + R+    T+A     A     +H +LMARRG  S
Sbjct: 790 AAGRTVVVIAHRLATVRN--ADTIAVLDRGAVVESGRHADLMARRGPYS 836


>12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356
          Length = 480

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
 Frame = +2

Query: 611 KPTNSQDALVNETKEVT----AASAFNVVKEKDWSKHTKPCQDVLH-GIAP--------I 751
           KP   +  LV  +++++    ++SA N +KE+    H  PCQ+    G+AP         
Sbjct: 239 KPPKPKRNLVEISQQISHQSSSSSAANDIKEE--KPHNPPCQEEKKSGMAPPPSPPPRPS 296

Query: 752 NTAVNSVTKPKPA-GTDDGFKGEGAACGTSVVKVAHQMISSRSPRGSTVASPSEDATA 922
           +    S++    A      F  + +   T+    A ++I SRS R +  A+P EDA A
Sbjct: 297 HRRARSMSITGSAKSVRFPFTRQASRSTTTTTTTAFKVIRSRSSRAAATAAPPEDAPA 354


>11_04_0167 + 14382976-14385244,14389373-14389842
          Length = 912

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = -2

Query: 816 SPLKPS--SVPAGFGFVTEFTAVLIGAMPWSTSWHGLVCFDQSFSLTTLN 673
           SPL  +   V  GFG+  E      G  P S +W G+VC     S+  L+
Sbjct: 324 SPLTTTLLQVAEGFGYPYELAKTWKGNDPCSPAWVGIVCTSSDVSMINLS 373


>02_02_0509 -
           11064209-11064470,11065945-11066132,11066249-11066493,
           11066816-11066987,11067090-11067496,11068443-11068587
          Length = 472

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 14/55 (25%), Positives = 24/55 (43%)
 Frame = +2

Query: 809 KGEGAACGTSVVKVAHQMISSRSPRGSTVASPSEDATAPDPQHYNLMARRGSXSL 973
           +  GAA    V    H  +S R PR S + +  +    P+    N+ +  GS ++
Sbjct: 35  RSHGAAAAAPVASKGHLFLSQRQPRTSNLEAVGDVTAVPEDYTENMPSSSGSTNV 89


>02_01_0176 +
           1207792-1208081,1208212-1208329,1208495-1208668,
           1209588-1209751,1209861-1209948,1210125-1210178,
           1210798-1210884
          Length = 324

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 519 QKNLNRSPDRRPHRKIHSFTYATLNRIYYLVNPRIV 626
           +K+++ SPD + HR + SF Y  L  I Y  + R++
Sbjct: 120 KKHMDSSPDFKNHRIVKSFLYQILRGIAYCHSHRVL 155


>05_03_0179 - 9257066-9258946
          Length = 626

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -3

Query: 962 CLDAPSDYSAEGP--ERWRPQTATPPWTRAE 876
           CLD  S+Y+A  P   RWR   A  PW +AE
Sbjct: 353 CLDRSSEYTARSPLVPRWR---AVIPWNQAE 380


>12_02_0643 - 21461123-21461902
          Length = 259

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 23/82 (28%), Positives = 35/82 (42%)
 Frame = +1

Query: 835  FCSEGRTSDDIFSVSARVHGGVAV*GRHRSGPSAL*SDGASRQXESPRXAGTLAPSSPPP 1014
            FC + R S   FS+ A     V+V  RH +  +A  +   + + + P+ +      +PPP
Sbjct: 148  FCGQVRVSS-AFSLLAATSFSVSVYTRHAAKRAAAVTPPPTTKKKKPQSSRRPPSRTPPP 206

Query: 1015 EGRXXAPXLHITGRXNRXPVXR 1080
            E R     L   GR    P  R
Sbjct: 207  ERRESPSPLR--GRPRTPPPPR 226


>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
          Length = 574

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -3

Query: 947 SDYSAEGPERWRPQTATPPWTRAETEKISSDVRPSLQKYHTPLLRL 810
           + YS   P    P TA PP    + E++++   P  Q Y  P +RL
Sbjct: 361 AQYSQPPPASANPSTAVPPSVHQQPEEVAAPYGPPPQSY-PPNVRL 405


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,059,184
Number of Sequences: 37544
Number of extensions: 554222
Number of successful extensions: 2277
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2273
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3678130032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)