Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_O11
         (1176 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   2.5  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   4.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   9.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 515 GWGGGXGXPPPXGGEKGXPXKGG 583
           G G G G P   GG  G P  GG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGG 226



 Score = 24.6 bits (51), Expect = 5.7
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = +2

Query: 515 GWGGGXGXPPPXGGEKGXPXKGGXXXKKNXXKRAPKGXXXXKGXXGG 655
           G GG  G P P GG  G    GG         R  +G     G  GG
Sbjct: 214 GGGGSSGGPGPGGGGGG----GGRDRDHRDRDREREGGGNGGGGGGG 256



 Score = 24.2 bits (50), Expect = 7.5
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 498 KTXXPXXGGGGXGXPPPXGG 557
           K   P  GGGG G   P GG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGG 215



 Score = 24.2 bits (50), Expect = 7.5
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 510 PXXGGGGXGXPPPXGG 557
           P  GGG  G P P GG
Sbjct: 212 PGGGGGSSGGPGPGGG 227


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +3

Query: 477 PPPPPPXKTXXPXXGGGGXGXP 542
           PPPPPP         GG  G P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGP 606



 Score = 25.4 bits (53), Expect = 3.2
 Identities = 18/62 (29%), Positives = 18/62 (29%)
 Frame = -2

Query: 656 PPPXXLXGXXXLLGPFXXNFFXGXXPLFXGXPFPPXXGGXTXXPPPXPXXXGFXXGGGGG 477
           PP   L      L P    F  G   L    P P         PPP P   G   G  G 
Sbjct: 550 PPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGS 609

Query: 476 XP 471
            P
Sbjct: 610 RP 611


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 472 GXPPPPPXKKPXXXGXGG 525
           G PPPPP   P     GG
Sbjct: 781 GSPPPPPPPPPSSLSPGG 798


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 9.9
 Identities = 14/46 (30%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
 Frame = -2

Query: 653 PPXXLXGXXXLLGPFXXNFFXGXXPLFXGXPFP--PXXGGXTXXPP 522
           PP  + G    + P   N   G      G P P  P  GG    PP
Sbjct: 268 PPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPP 313


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.152    0.514 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,416
Number of Sequences: 2352
Number of extensions: 13766
Number of successful extensions: 57
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 132842775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)