Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_O09
(1148 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 36 0.011
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 36 0.011
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 35 0.018
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 35 0.024
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 34 0.032
SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces pomb... 32 0.17
SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr 1... 32 0.17
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 31 0.23
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 31 0.23
SPCC1620.09c |tfg1||transcription factor TFIIF complex alpha sub... 31 0.23
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 31 0.30
SPAC3A12.13c |||translation initiation factor eIF3 complex subun... 30 0.53
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 30 0.70
SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces pom... 30 0.70
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 30 0.70
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 29 0.92
SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyc... 29 1.2
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 29 1.2
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 1.6
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 28 2.1
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 2.1
SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces pom... 28 2.8
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 2.8
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 27 3.7
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 27 3.7
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 27 4.9
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 6.5
SPAC11D3.08c |||amino acid permease, unknown 1|Schizosaccharomyc... 27 6.5
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 8.6
SPAC1565.02c |||GTPase activating protein|Schizosaccharomyces po... 26 8.6
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 26 8.6
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 26 8.6
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 35.9 bits (79), Expect = 0.011
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 4/199 (2%)
Frame = +2
Query: 266 NTFIEDLKTNKSHQGNKENIFEDNCAVVNGKASIPDTIDASANTNCIVPHDELENSDLDE 445
N +D +++ + E +D VN IP+ + S N DE DL E
Sbjct: 3961 NGVTKDSVVSENENSDSEEENQDLDEEVN---DIPEDLSNSLNEKL---WDEPNEEDLLE 4014
Query: 446 KLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNK-NPEIKVS 622
+ E S N+ SDL+ + D + +E K D+ E + SDD+ + ++ P+I+ +
Sbjct: 4015 T-EQKSNEQSAANNESDLVSKEDDNKALEDK-DRQEKEDEEEMSDDVGIDDEIQPDIQEN 4072
Query: 623 SEF---SIGPKVSAEEDIKISQNAPDPVERIDDKDECQQQENPEKVHKGSNIELNKSVSD 793
+ + ED+K+ + D V + D ++ + E + ++ E ++ + D
Sbjct: 4073 NSQPPPENEDHLDLPEDLKLDEKEGD-VSKDSDLEDMDMEAADENKEE-ADAEKDEPMQD 4130
Query: 794 HIQSINEYSEIAVPIKKDE 850
+ E + + I++D+
Sbjct: 4131 FEDPLEENNTLDEDIQQDD 4149
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 35.9 bits (79), Expect = 0.011
Identities = 26/110 (23%), Positives = 53/110 (48%)
Frame = +2
Query: 416 DELENSDLDEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILL 595
+E ++SDL +KLT E+S N + + +S ++ K D+ +++ K +D L
Sbjct: 939 EESKSSDLGKKLTARQEEIS--NLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLK 996
Query: 596 NKNPEIKVSSEFSIGPKVSAEEDIKISQNAPDPVERIDDKDECQQQENPE 745
NK E++V + +D+K N + + + + E ++ EN +
Sbjct: 997 NKVSEVEVERNALLASNERLMDDLK---NNGENIASLQTEIEKKRAENDD 1043
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 35.1 bits (77), Expect = 0.018
Identities = 28/127 (22%), Positives = 58/127 (45%)
Frame = +2
Query: 443 EKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNPEIKVS 622
+K E+ +E + +S+ S +++ +++ S+E+ S++ +++ K E K S
Sbjct: 78 KKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIV-KTEEKKES 136
Query: 623 SEFSIGPKVSAEEDIKISQNAPDPVERIDDKDECQQQENPEKVHKGSNIELNKSVSDHIQ 802
S S S EE+ + V +I++K E + E S E + S S+ +
Sbjct: 137 SSESSSSSESEEEE--------EAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEE 188
Query: 803 SINEYSE 823
+ E +E
Sbjct: 189 EVVEKTE 195
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 34.7 bits (76), Expect = 0.024
Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Frame = +2
Query: 290 TNKSHQGNKENIFEDNCAVVNGKASIPDTIDASANTNCIVPHDELENS--DLDEKLTEND 463
++ S E+ ED+ + + S ++ ++++ E E+S D D + +D
Sbjct: 183 SSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSD 242
Query: 464 TEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNPEIKVSSEFSIGP 643
+E + SD S ++ D DS+ + DD + + E + SSE S
Sbjct: 243 SESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDST 302
Query: 644 KVSAEED 664
S++ D
Sbjct: 303 SSSSDSD 309
Score = 32.7 bits (71), Expect = 0.099
Identities = 36/185 (19%), Positives = 69/185 (37%), Gaps = 7/185 (3%)
Frame = +2
Query: 278 EDLKTNKSHQGNKENIFEDNCAVVNGKASIPDTIDASANTNCIVPHDELENSDLDEKLTE 457
E ++ G+ + E + + ++S D +S++++ E + D D +
Sbjct: 94 EKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDS---ESESSSEDSDSSSSS 150
Query: 458 NDTEVSKGNHTSDLLLESDQAQEIEQKNDKDS------AETHKCNSD-DIILLNKNPEIK 616
+D+E + SD S ++ D DS +E+ + D D + + E +
Sbjct: 151 SDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESE 210
Query: 617 VSSEFSIGPKVSAEEDIKISQNAPDPVERIDDKDECQQQENPEKVHKGSNIELNKSVSDH 796
SSE S S+ + + S D D + E+ + S+ E S D
Sbjct: 211 SSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDS 270
Query: 797 IQSIN 811
S N
Sbjct: 271 DSSSN 275
Score = 31.1 bits (67), Expect = 0.30
Identities = 42/220 (19%), Positives = 78/220 (35%)
Frame = +2
Query: 260 SSNTFIEDLKTNKSHQGNKENIFEDNCAVVNGKASIPDTIDASANTNCIVPHDELENSDL 439
SS+ + ++ + + D+ + + S + D ++++ E + D
Sbjct: 139 SSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDS 198
Query: 440 DEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNPEIKV 619
D + +D+E + SD S ++ D DS+ +S D + + +
Sbjct: 199 DSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSS----SSSDSESESSSEDSDS 254
Query: 620 SSEFSIGPKVSAEEDIKISQNAPDPVERIDDKDECQQQENPEKVHKGSNIELNKSVSDHI 799
SS S S+ +D S N+ D DD E + S+ + S SD
Sbjct: 255 SSSSSDSESESSSKDSDSSSNSSDSE---DDSSSDSSDSESESSSEDSDSTSSSSDSDSS 311
Query: 800 QSINEYSEIAVPIKKDEVLTMEVVDHDSTNIVINXADTVV 919
S + + D + EV STN + T V
Sbjct: 312 SSSEDGNS-----NTDTTTSGEVSAQSSTNSTSSEESTSV 346
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 34.3 bits (75), Expect = 0.032
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Frame = +2
Query: 428 NSDLDEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNP 607
+ D++EK T+ E + T E+D + NDKD +T ++D + ++
Sbjct: 436 HKDVEEKDTKITNEDTGKTETDVKAKETDSI----EANDKDE-KTDSKETEDKVEETESK 490
Query: 608 EIKVSSEFSIGPKVSAEEDIKISQNAPDPVERIDDKDECQ---QQENPEKVHKGSNIELN 778
E V ++ + +V +E+ S+ D VE+ D KD + + +N E K ++ +
Sbjct: 491 EADVKAKETDSIEVDDKEEKTDSKETADKVEQTDSKDTNEKPAKDDNKEANEKAEKVD-S 549
Query: 779 KSVSDHIQ 802
K V + I+
Sbjct: 550 KDVKEKIE 557
Score = 26.6 bits (56), Expect = 6.5
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Frame = +2
Query: 416 DELENSDLDEKLTENDTE---VSKGNHTSDLLLESDQAQEIEQKNDK-DSAET-HKCNSD 580
D +E +D DEK +TE + +D+ + + E++ K +K DS ET K
Sbjct: 464 DSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEKTDSKETADKVEQT 523
Query: 581 DIILLNKNPEIKVSSEFSIGPKVSAEEDIK 670
D N+ P + E + + +D+K
Sbjct: 524 DSKDTNEKPAKDDNKEANEKAEKVDSKDVK 553
>SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 424
Score = 31.9 bits (69), Expect = 0.17
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +2
Query: 446 KLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNPEIKVSS 625
+LT+ +TE ++ H ++ D + ++A + D ++LNK+ +++V
Sbjct: 2 ELTQENTEENEKTHVESIVKFEDSNRGTITDFHIETANNEE-EKDANVILNKSVKMEVEE 60
Query: 626 EFSIGPKVSAEEDIKISQNAPDPVERIDDKDECQQQENPEKVHKGS-NIELNKSVSDH 796
S E DI++ Q P I K + H+G+ N +LN S +DH
Sbjct: 61 VNGHVDSSSTETDIEM-QVIQQPT--IPKKPPVSAHRRGPRKHRGNANSQLNLSTADH 115
>SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 484
Score = 31.9 bits (69), Expect = 0.17
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 755 KGSNIELNKSVSDHIQSINEYSEIAVPIKKDEVLTMEVVDHDSTNIVINXADTVVI 922
KGSNI+LNK++ DH+ + E + +P + +T V + N D ++
Sbjct: 17 KGSNIKLNKTLQDHLDELEE--QFTIPTELLHRVTDRFVSELYKGLTTNPGDVPMV 70
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1052
Score = 31.5 bits (68), Expect = 0.23
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 8/220 (3%)
Frame = +2
Query: 245 LDTKLSSNTFIEDLKTNKSHQGNKENIFEDNCAVVNGKASIPDTIDASANTNCIVPHDEL 424
L+ ++ N+ +E+ + K +Q +++ D+ +++ G I T++ + +T+ +DE+
Sbjct: 735 LEQPINENSNVEEAE--KDYQPSEK----DDKSLIGG---ILSTVEMTQSTDV---NDEI 782
Query: 425 ENSDLDEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKN 604
EN+ E+ + KG+ +DL E+ Q + +S + + D NK
Sbjct: 783 ENTLTIPVEVEHSDNIDKGSEENDLGKEAVDEANNNQNDVLESVVVEQSTTTD-DCENKV 841
Query: 605 PEIKVSSEFSIGPKVSAEEDIKISQNAPDPVERIDDKDEC--QQQENPEKVHKGSNIELN 778
E +++ + S V+A E I+Q A VE+ D E + +EN + S E N
Sbjct: 842 YEGQMNDKNSSLDMVNACEG--INQTAIGFVEKPDKVTELIDEAEENIDISQDISMTETN 899
Query: 779 KSVSDHIQSINEYSEIAV------PIKKDEVLTMEVVDHD 880
+V D +Q+ N + V I+KDE+ ++ V D
Sbjct: 900 -AVDDEVQAENSILQDEVEETRQDDIEKDELEDIKEVKED 938
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 31.5 bits (68), Expect = 0.23
Identities = 19/97 (19%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +2
Query: 272 FIEDLKTNKSHQGNKENIFEDNCAVVNGKASIPDT-IDASANTNCIVPHDELENSDLDEK 448
F+ + + +KEN + + + K ++P+T +D P ++N+ +
Sbjct: 343 FVASKPVTDTPELSKENTLVSSENLNDPKPNLPETEVDFGEPLEVEAPSFVVQNNSAVQP 402
Query: 449 LTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAE 559
T+ +E S HT+++ + E++N+KD+++
Sbjct: 403 TTQKTSEDSTDLHTNEIPNVAQPPSSFEKENNKDTSK 439
>SPCC1620.09c |tfg1||transcription factor TFIIF complex alpha
subunit Tfg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 490
Score = 31.5 bits (68), Expect = 0.23
Identities = 27/115 (23%), Positives = 54/115 (46%)
Frame = +2
Query: 422 LENSDLDEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNK 601
+E ++ D K ++ ++ K T++L E+DQ ++E++ND+ + K + LL K
Sbjct: 280 MEGNEEDNKKLKD--KIKKEMLTANLFGEADQDVDLEEENDRQMSREGKKLQRYLKLLEK 337
Query: 602 NPEIKVSSEFSIGPKVSAEEDIKISQNAPDPVERIDDKDECQQQENPEKVHKGSN 766
N + E E+ S +A E + +++E Q++E K +N
Sbjct: 338 NLAYESDEE--------DEDPYASSHDASSEEEVLQEEEELQKREEKLKSRFSAN 384
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 31.1 bits (67), Expect = 0.30
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +2
Query: 497 LLLESDQAQEIEQKNDKDSAETH-KCNSDDIILLNKNPEIKVSSEFSIGPKVSAEEDIKI 673
L ++ DQ Q +E+K KD+ + H + S I L+ K E +V EED K
Sbjct: 176 LFMKEDQLQYLEEKTIKDTVKKHSEFISYPIQLVVTREVEKEVPEEEETEEVKNEEDDK- 234
Query: 674 SQNAPDPVERIDDKDECQQQENPE-KVHKGSNIELNKS 784
AP +E +DD+ E ++++ + K ELNK+
Sbjct: 235 ---AP-KIEEVDDESEKKEKKTKKVKETTTETEELNKT 268
>SPAC3A12.13c |||translation initiation factor eIF3 complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 274
Score = 30.3 bits (65), Expect = 0.53
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +2
Query: 668 KISQNAPDPVERIDDKDECQQQENPEKVHKGSN--IELNKSVSDHIQSINEYSEIAVPIK 841
K SQ++ P +R DD+++ ++EN E + S+ + + S S + Q N+ + I I+
Sbjct: 24 KDSQSSSKPKKRFDDEEDEDEEENKESLQNDSHSVSQKSSSSSQNDQGSNKMTRIQQKIQ 83
Query: 842 K 844
+
Sbjct: 84 E 84
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 29.9 bits (64), Expect = 0.70
Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Frame = +2
Query: 329 EDNCAVVNGKASIPDTI---DASANTNCIVPHDELENSDLDE-KLTENDTEVSKGNHTSD 496
ED + K P+++ DA+ + N ++ L ++ ++ +L DT V KG D
Sbjct: 30 EDTATAILRKKRKPNSLVVDDATNDDNSVIT---LSSNTMETLQLFRGDTVVVKGKRRKD 86
Query: 497 ---LLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNPEIKVSSEFSIGPKVSAEEDI 667
++L ++ ++ + ++ + DI+ +N P+IK + S+ P E +
Sbjct: 87 TVLIVLTDEEMEDGVARINRVVRNNLRVRLGDIVTINPCPDIKYAERISVLPLADTVEGL 146
>SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 29.9 bits (64), Expect = 0.70
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = +2
Query: 440 DEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNPEIKV 619
+ +L E+ + +K + E +Q + +Q++ D + N+ + ++ E
Sbjct: 382 NNRLVESQAQFTKNREATATPTEEEQIEGYDQEHT-DELGMSRANTTE-----ESAETHE 435
Query: 620 SSEFSIGPKVSAEEDIKISQNAPDPVERIDDKDECQQQENPEKVHKGS-NIELNKSVSD 793
E GP + EE I P P E +++ + E+V KG+ N+EL ++ ++
Sbjct: 436 VIEEKSGPPAAEEEPISGVAEKPSPNEEEQPAIGGKEEVDVEEVTKGTGNLELGETTTE 494
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 29.9 bits (64), Expect = 0.70
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 2/163 (1%)
Frame = +2
Query: 368 PDTIDASANTNCIVPHDELENSDLDEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDK 547
P +ID AN+ + D E K+ N T S SDLL + +A +I N+K
Sbjct: 6 PKSIDKDANSTEV---DAAEQDAASVKI--NSTRASPNG--SDLLNDDSEAAKI-TTNEK 57
Query: 548 DSAETHKCN-SDDIILLNKNPEIKVSSEFSIGPKVSAEEDIKISQNAPD-PVERIDDKDE 721
S+ N S + +NK + + ++ E++ + +N + +++DE
Sbjct: 58 QSSPVDSHNESPNDTTINKGEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDE 117
Query: 722 CQQQENPEKVHKGSNIELNKSVSDHIQSINEYSEIAVPIKKDE 850
+E+ E + ++ D N++ +I + +DE
Sbjct: 118 EDDEEDEEDEDESGGGRRKRARHDR---RNQFLDIEAEVDEDE 157
Score = 27.9 bits (59), Expect = 2.8
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +2
Query: 260 SSNTFIEDLKTNKSHQGNKENIFEDNCAVVNGKASIPDTIDASANTNCIVPHDELENSDL 439
S N D NK GN+ + DN VN D + N ++E E +
Sbjct: 64 SHNESPNDTTINKGEDGNENEV--DN---VNNNDKKEDEDNVEENEEEADANEEEEEDEE 118
Query: 440 DEKLTENDTEVSKGNHTSDLLLES-DQAQEIEQKNDKDSAE 559
D++ E D + S G + +Q +IE + D+D E
Sbjct: 119 DDEEDEEDEDESGGGRRKRARHDRRNQFLDIEAEVDEDEEE 159
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 29.5 bits (63), Expect = 0.92
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +2
Query: 506 ESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNPEIKVSSEFSIGP-KVSAEEDIKISQN 682
E +A +++++++ DSA + D + NK + KVS++ + KV+ + S +
Sbjct: 1822 EKQEAHKVKKRHNIDSANLSRGTERDEDIPNKRAKNKVSTDQTAADNKVTKPRLDESSSS 1881
Query: 683 APDPVERIDDKD-ECQQQENPEKVHKGSN 766
D + +ID+ + E + P V K +
Sbjct: 1882 KQDVLNKIDESEIEQASSKKPGYVEKNKD 1910
>SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 372
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 368 PDTIDASANTNCIVPHDELENSDLDE 445
P+ ID S+N++CI L N D DE
Sbjct: 346 PEEIDLSSNSSCIARFINLTNEDYDE 371
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/66 (21%), Positives = 35/66 (53%)
Frame = +2
Query: 362 SIPDTIDASANTNCIVPHDELENSDLDEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKN 541
S+ ++ +AN + P + + + +EK T ++ + + NH S L S+ +E ++++
Sbjct: 156 SVEPQMENTANITIVSPSLKESDFESEEKATNDNNGLIETNHNSKLEESSEHEEEEDEES 215
Query: 542 DKDSAE 559
+ + E
Sbjct: 216 NIERTE 221
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 28.7 bits (61), Expect = 1.6
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Frame = +2
Query: 269 TFIEDLKTNKSHQGNKENIFEDNCAVVNGKA---SIPDTIDASANTNC----IVPHDELE 427
+F D +N S N + D+ AV++ + ++PD+ +A N IV +
Sbjct: 298 SFFGDTLSNLSSSLNDKKSPNDDHAVLDSELMEQTLPDSAEAVEIANNVKEDIVSTANDD 357
Query: 428 NSDLDEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNP 607
++LD + E S T + +S+ QE+E+ + + T +D+II NK
Sbjct: 358 ANELDNTSEKATLETSSKPVTEQAIEQSEVVQEVEEGDTNMTTNTILKPTDEII--NKGY 415
Query: 608 EIKVSSEFS 634
++S S
Sbjct: 416 AYSITSSHS 424
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 28.3 bits (60), Expect = 2.1
Identities = 21/101 (20%), Positives = 40/101 (39%)
Frame = +2
Query: 275 IEDLKTNKSHQGNKENIFEDNCAVVNGKASIPDTIDASANTNCIVPHDELENSDLDEKLT 454
+ ++ S G+ N+ A V+ AS P D+S N+N + P N + +
Sbjct: 208 LNSFNSSTSTSGSSSNV----AAEVSNDASQPSNQDSSLNSNIVKPPLPPSNVQSNSSSS 263
Query: 455 ENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNS 577
EN + + +++ ++ E ND E C +
Sbjct: 264 ENVPKPNAETQEDLPTIDAHESSLYENVNDSRLYEVPACRN 304
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.3 bits (60), Expect = 2.1
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 461 DTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNPEIKV-SSEFSI 637
+ E +K + L +S + +E+E++ K+S+E N DD+I ++K S+ F +
Sbjct: 1602 EKEKTKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEKLKENSANFDV 1661
Query: 638 G-PKVSAEEDIK 670
KV AE + +
Sbjct: 1662 KLKKVVAETEFR 1673
>SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 431
Score = 27.9 bits (59), Expect = 2.8
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -1
Query: 569 IYVFQLNLCRFFVQFLGLDPIPATDH*YDYLLILQCHFLSVSRLNLNF 426
I V+ +N+CRFF +GL PA D ++L+ F ++ L+L F
Sbjct: 216 IIVYAVNMCRFFT--VGLQ--PAADRPGMFILVSPPSFTGLTLLDLAF 259
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.9 bits (59), Expect = 2.8
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Frame = +2
Query: 419 ELENSDLDEKLTENDTEVSKGNHTSDLLLES-DQAQEIEQKNDKDSA-ETHKCNSDDIIL 592
E E+ +L E L ++ T +S + D + E D + K E +K N I+
Sbjct: 483 EYESKNLLELLDKHQTALSSVENRLDEISEIVDSYHKYSGVRTKLQVFEENKTNKSAILA 542
Query: 593 LNKNPEIKVSSEFSIGPKVSAEEDIKISQNAPDPVERIDDKDECQQQENPEKVHKGSNIE 772
N + + S FS ++D ++ VE D + + Q++E E +
Sbjct: 543 ---NQLMTLKSSFSEVMSYELKDDDNYNEELDKLVE--DVRKKLQEKEEAESSLRSVRER 597
Query: 773 LNKSVSDHIQSINEYSE 823
L +S +QSIN+ +E
Sbjct: 598 LEIRISLSVQSINDLTE 614
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1778
Score = 27.5 bits (58), Expect = 3.7
Identities = 27/118 (22%), Positives = 52/118 (44%)
Frame = +2
Query: 230 PLXDILDTKLSSNTFIEDLKTNKSHQGNKENIFEDNCAVVNGKASIPDTIDASANTNCIV 409
PL D +K F D +N S +G+ ++DN V+ SI S N +
Sbjct: 1006 PLDDTFMSKKVKLDFSSD--SNVSERGD----YDDNAKKVDEVISIEKVDGYSKENNVPL 1059
Query: 410 PHDELENSDLDEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDD 583
D+L NS E E+ + + + S L ++ ++I +++D++ + + + D
Sbjct: 1060 SEDDLSNS--SESSNESVYSLVEESDAS-LAADNMDIEDISEESDREELSSMRFGAQD 1114
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 27.5 bits (58), Expect = 3.7
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 1/150 (0%)
Frame = +2
Query: 428 NSDLDEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNP 607
NS ++E + D+E ++ + ++ ++ E K+ ++ H + ++ + +K P
Sbjct: 177 NSKIEEPIHRIDSEHNEPEYHTE---SKNEESEHNTKSIREEPIHHVDSKNEEPVYSKIP 233
Query: 608 EIKVSSEFSIGPKVSAEEDIKISQNAP-DPVERIDDKDECQQQENPEKVHKGSNIELNKS 784
E K+ EFS ++ +K N P + D + +E P V + + K
Sbjct: 234 E-KMGDEFSENSLSKSDSAVKQEGNLLIHPNNSLKDTAPSKCKEPP--VDEALS---KKE 287
Query: 785 VSDHIQSINEYSEIAVPIKKDEVLTMEVVD 874
+SD I I + I I+ + EV+D
Sbjct: 288 ISDDIAQITSVTPITEKIEDKDKYISEVID 317
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 27.1 bits (57), Expect = 4.9
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Frame = +2
Query: 425 ENSDLDEKLTENDTEVSKGNHTSDLLL-------ESDQAQE---IEQKNDKDSAETHKCN 574
E +L K+T ++ +GN L E+D +Q+ QK DK ET++
Sbjct: 35 ECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKHATERQKLDKGDEETNETQ 94
Query: 575 SDDIILLNKNPEIKVSSEFSIGPKVSAEEDIKISQNAPDPVERIDDKDECQQQENPEKVH 754
+D LLN + ++ + K S + + +N P ++ ++ + + + ++
Sbjct: 95 QED--LLNTLLQQMEDTKITTAEKSSVQSSLNTKENTPQQPKKSRNRQKERLERRKAEMK 152
Query: 755 KGS 763
K S
Sbjct: 153 KMS 155
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 319 FFITLMALVGLEIFNKCIR*QFCIKYIXQGL 227
+FI ++ + G EIF K Q CI Y + L
Sbjct: 439 YFIGILDIAGFEIFEKNSFEQLCINYTNEKL 469
>SPAC11D3.08c |||amino acid permease, unknown 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = +2
Query: 491 SDLLLESDQAQEIEQKNDKDSAETHKCNSDDIILLNKNPEIKVSSEFS 634
SD+ ES + + + +N+ + E+ + N DD +L++ + + + EFS
Sbjct: 2 SDIDKESLKQNQKQWENEVELGESREANQDDELLMSLGYKPEFTREFS 49
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 8.6
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 473 SKGNHTSDLLLESDQAQEIEQKNDKDSAETHK-CNSDDIILLNKNP 607
S ++T LESD+ ND S+ET K +DD++ L + P
Sbjct: 312 STDSNTDSFGLESDERSLPSVSNDLKSSETLKNPRNDDLLTLQQPP 357
>SPAC1565.02c |||GTPase activating protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 8.6
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 764 NIELNKSVSDHIQSINE-YSEIAVPIKKDEVLTMEVVDHDST 886
N+EL K D I I E Y+ + I+KDE T HDST
Sbjct: 28 NLELFKKYDD-INLIKEAYNHVHKLIQKDERYTAVFFAHDST 68
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = -2
Query: 166 SLVFILK---NRRATINKLKCRRRREEKTDNERRND 68
SLV +++ +R+ ++ + + R +EEKTDNE ND
Sbjct: 112 SLVSVIRQTIDRKKSLER-RVREEQEEKTDNEDDND 146
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 26.2 bits (55), Expect = 8.6
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 371 DTIDASANTNCIVPHDELENS-DLDEKLTENDTEVSKGNHTSDLLLESDQAQEIEQKNDK 547
D +D S + +N D E + EN ++ GN+ + LLES++ + ++ N K
Sbjct: 8 DEVDISNSLKAFPVDIATDNQKDKHENVGENVSDEDDGNYIASKLLESNRRTKGKKGNGK 67
Query: 548 DS 553
S
Sbjct: 68 AS 69
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,734,337
Number of Sequences: 5004
Number of extensions: 76197
Number of successful extensions: 295
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 613592056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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