Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_O07
(1242 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 35 0.14
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.55
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.73
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.73
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 31 1.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.7
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 2.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 3.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 3.0
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 5.2
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 29 5.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 6.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 25 7.2
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 29 9.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 9.0
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +3
Query: 927 PPXXPXPPXPXXXXXXPPXPXXPPXXXPXXXPXXXXPXXXXPXXPPXXXXXPXPXXXXPX 1106
PP P PP P PP P PP P P P PP P P P
Sbjct: 27 PPPCPPPPPP--MCAPPPLPCPPPPICPPQF-CPPPPMCPPPPPPPPPPMCPPPPPPMPS 83
Query: 1107 XXXXXXXXPXP 1139
P P
Sbjct: 84 YSPCQSYAPAP 94
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.7 bits (71), Expect = 0.55
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = +2
Query: 671 PTXPTXAXPXPFRGXXXDXRPXPXXPXXXLXSPXPPXPSXRL----XIPPNPXXPPP 829
PT P A P P R + P P P SP PP P + +PP P PPP
Sbjct: 467 PTTPKPAPPPPSR--IPNPSPSP-QPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPP 520
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 32.3 bits (70), Expect = 0.73
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +2
Query: 671 PTXPTXAXPXPFRGXXXDXRPXPXXPXXXLXSPXPPXPSXRLXIPPNPXXPPP 829
PT P A P P R + P P P SP PP P + P + PPP
Sbjct: 460 PTTPKPAPPPPSR--IPNPSPSP-QPAEVSKSPPPPPPLPPIATPSSVPPPPP 509
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.73
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Frame = +1
Query: 883 PXPPXXXXPXXXXXXPXXXP---PXXXXXXXXLPPXXXXXXXXFXPXXXXXXXXPXXPPX 1053
P PP P P P P PP P P PP
Sbjct: 80 PAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPP 139
Query: 1054 XXPPPPXXXPXPP 1092
PPPP P PP
Sbjct: 140 HYPPPPPHYPPPP 152
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = +3
Query: 939 PXPPXPXXXXXXPPXPXXPPXXXPXXXPXXXXPXXXXPXXPPXXXXXPXPXXXXP 1103
P PP P P PP P P P PP P P P
Sbjct: 95 PAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYP 149
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 1036 PXXPPXXXPPPPXXXPXPP 1092
P PP PPPP P PP
Sbjct: 135 PPPPPHYPPPPPHYPPPPP 153
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/66 (28%), Positives = 24/66 (36%)
Frame = +2
Query: 632 STMTXHIXXXVXXPTXPTXAXPXPFRGXXXDXRPXPXXPXXXLXSPXPPXPSXRLXIPPN 811
+T+ +I V P P P R RP P P + P P P+ I P
Sbjct: 168 ATVAPYIERPVPARPTPYIERPVPARPAPYIERPEPARPAPYIERPVPARPAP--YIEPT 225
Query: 812 PXXPPP 829
P P P
Sbjct: 226 PARPAP 231
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/71 (26%), Positives = 19/71 (26%)
Frame = +3
Query: 927 PPXXPXPPXPXXXXXXPPXPXXPPXXXPXXXPXXXXPXXXXPXXPPXXXXXPXPXXXXPX 1106
PP P P PP P PP P P P P PP P P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPP--PPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPE 179
Query: 1107 XXXXXXXXPXP 1139
P P
Sbjct: 180 PRNPPRTPPSP 190
Score = 27.9 bits (59), Expect(2) = 2.0
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 695 PXPFRGXXXDXRPXPXXPXXXLX--SPXPPXPSXRLXIPPNPXXPPP 829
P P G P P P S PP P R+ P P PPP
Sbjct: 111 PAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPP 157
Score = 21.4 bits (43), Expect(2) = 2.0
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +2
Query: 911 PXPXXPPXXXXPXXPXXXXXXPPXXXXXXXXSPLXXXXXXXPPXXXPXXSP 1063
P P PP P P PP SP PP P P
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRPP----RTPPSPEPRNPPRTPPSPIPPPPP 196
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = +3
Query: 927 PPXXPXPPXPXXXXXXPPXPXXPP--XXXPXXXPXXXXPXXXXPXXPPXXXXXPXP 1088
P P PP P PP P PP P P P PP P P
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP 336
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 728 RPXPXXPXXXLXSPXPPXPSXRLXIPPN-PXXPPP 829
RP P P + P PP P R PP P PPP
Sbjct: 286 RPPPP-PSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = +3
Query: 927 PPXXPXPPXPXXXXXXPPXPXXPP--XXXPXXXPXXXXPXXXXPXXPPXXXXXPXP 1088
P P PP P PP P PP P P P PP P P
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP 346
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +2
Query: 728 RPXPXXPXXXLXSPXPPXPSXRLXIPPN-PXXPPP 829
RP P P + P PP P R PP P PPP
Sbjct: 296 RPPPP-PSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 2.2
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 927 PPXXPXPPXPXXXXXXPPXPXXPPXXXPXXXPXXXXP 1037
P P PP P PP P PP P P P
Sbjct: 119 PGGVPAPPNPPRTCCPPPTPAAPPPPPPPPPPAPEAP 155
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/75 (24%), Positives = 20/75 (26%)
Frame = +2
Query: 731 PXPXXPXXXLXSPXPPXPSXRLXIPPNPXXPPPXXXXSXXXXXXXXXXXXXXXXXXXXXX 910
P P +P PP P + PP P PPP S
Sbjct: 79 PLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEKQHQQQLRPTTA 138
Query: 911 PXPXXPPXXXXPXXP 955
P PP P P
Sbjct: 139 VSPPKPPSFAPPVPP 153
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/75 (24%), Positives = 20/75 (26%)
Frame = +2
Query: 731 PXPXXPXXXLXSPXPPXPSXRLXIPPNPXXPPPXXXXSXXXXXXXXXXXXXXXXXXXXXX 910
P P +P PP P + PP P PPP S
Sbjct: 301 PLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEKQHQQQLRPTTA 360
Query: 911 PXPXXPPXXXXPXXP 955
P PP P P
Sbjct: 361 VSPPKPPSFAPPVPP 375
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical protein
H06A10.2 protein.
Length = 305
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/71 (23%), Positives = 17/71 (23%)
Frame = +3
Query: 927 PPXXPXPPXPXXXXXXPPXPXXPPXXXPXXXPXXXXPXXXXPXXPPXXXXXPXPXXXXPX 1106
PP P PP P P P P P PP P P P
Sbjct: 186 PPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPT 245
Query: 1107 XXXXXXXXPXP 1139
P P
Sbjct: 246 AAPGAAGPPGP 256
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical protein
T28C6.1 protein.
Length = 281
Score = 29.5 bits (63), Expect = 5.2
Identities = 28/122 (22%), Positives = 28/122 (22%)
Frame = -3
Query: 1102 GXXXXGXGXXXXXGGXXGXXXXGXXXXGXXXGXXXGGXXGXGGXXXXXXGXGGXGXXGGX 923
G G GG G G G G GG G G G G G GG
Sbjct: 149 GGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGW-GGQNGGGQGGNQGGGGGRGGNQGGE 207
Query: 922 XXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXVXGDXXXGGRGGGXXGXEXXXXX 743
G G GGRGGG G
Sbjct: 208 QGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWGGGGRGGGWGGWGRGSRW 267
Query: 742 GW 737
GW
Sbjct: 268 GW 269
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical protein
F54D11.2 protein.
Length = 1145
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 707 RGXXXDXRPXPXXPXXXLXSPXPPXPSXRLXIPPNPXXPPP 829
RG D RP P P L +P S + + P+P PPP
Sbjct: 1094 RGDFRDHRPPPPPPLPILQNPVATPMSQQPPL-PSPAPPPP 1133
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 5.2
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 939 PXPPXPXXXXXXPPXPXXPPXXXPXXXPXXXXPXXXXPXXP 1061
P PP P PP P PP P P P P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 5.2
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 939 PXPPXPXXXXXXPPXPXXPPXXXPXXXPXXXXPXXXXPXXP 1061
P PP P PP P PP P P P P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 5.2
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 939 PXPPXPXXXXXXPPXPXXPPXXXPXXXPXXXXPXXXXPXXP 1061
P PP P PP P PP P P P P
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 1036 PXXPPXXXPPPPXXXPXPPXXXPXXP 1113
P P PPPP P PP P P
Sbjct: 58 PPCPAQFCPPPPICPPPPPPPMPCPP 83
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 1036 PXXPPXXXPPPPXXXPXPPXXXPXXP 1113
P PP PP P P PP P P
Sbjct: 69 PICPPPPPPPMPCPPPPPPMPRPSCP 94
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 25.4 bits (53), Expect(2) = 7.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 927 PPXXPXPPXPXXXXXXPPXPXXPP 998
PP P PP P PP P PP
Sbjct: 794 PP--PPPPLPPISSGAPPPPPPPP 815
Score = 21.8 bits (44), Expect(2) = 7.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 759 SXPXXPPPLPPXXXSP 806
S P PPP PP P
Sbjct: 763 SIPPPPPPPPPPHCEP 778
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 25.4 bits (53), Expect(2) = 7.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 927 PPXXPXPPXPXXXXXXPPXPXXPP 998
PP P PP P PP P PP
Sbjct: 794 PP--PPPPLPPISSGAPPPPPPPP 815
Score = 21.8 bits (44), Expect(2) = 7.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 759 SXPXXPPPLPPXXXSP 806
S P PPP PP P
Sbjct: 763 SIPPPPPPPPPPHCEP 778
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 1036 PXXPPXXXPPPPXXXPXPPXXXPXXP 1113
P P PPPP P PP P P
Sbjct: 117 PGTPRIYLPPPPRPPPVPPLSPPERP 142
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 9.0
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 731 PXPXXPXXXLXSPXPPXPSXRLXIPPNPXXPPP 829
P P P +P PP P + P P PPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,710,252
Number of Sequences: 27780
Number of extensions: 280670
Number of successful extensions: 2064
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1588
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3443371140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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