Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_O04
(1217 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 147 1e-35
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 147 1e-35
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 147 1e-35
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 142 3e-34
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 142 3e-34
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 142 3e-34
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 142 3e-34
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 128 8e-30
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam ... 31 2.2
U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam ... 31 2.2
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ... 31 2.2
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ... 31 2.2
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 147 bits (357), Expect = 1e-35
Identities = 66/134 (49%), Positives = 86/134 (64%)
Frame = +3
Query: 186 GNITFTQVQAGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGHPND 365
G I F Q + + G ++GL G++GFH+HEKGD GCLS G H+NP HG P+D
Sbjct: 42 GTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDD 100
Query: 366 VNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 545
NRH+GDLGN+ + + I + D SLSG + IIGR+VV+HEK DD G+ S+
Sbjct: 101 SNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKT 160
Query: 546 TGNAGGRVACGVIG 587
TGNAG R+ACG IG
Sbjct: 161 TGNAGSRLACGTIG 174
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 147 bits (357), Expect = 1e-35
Identities = 66/134 (49%), Positives = 86/134 (64%)
Frame = +3
Query: 186 GNITFTQVQAGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGHPND 365
G I F Q + + G ++GL G++GFH+HEKGD GCLS G H+NP HG P+D
Sbjct: 42 GTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDD 100
Query: 366 VNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 545
NRH+GDLGN+ + + I + D SLSG + IIGR+VV+HEK DD G+ S+
Sbjct: 101 SNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKT 160
Query: 546 TGNAGGRVACGVIG 587
TGNAG R+ACG IG
Sbjct: 161 TGNAGSRLACGTIG 174
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 147 bits (357), Expect = 1e-35
Identities = 66/134 (49%), Positives = 86/134 (64%)
Frame = +3
Query: 186 GNITFTQVQAGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGHPND 365
G I F Q + + G ++GL G++GFH+HEKGD GCLS G H+NP HG P+D
Sbjct: 42 GTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDD 100
Query: 366 VNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 545
NRH+GDLGN+ + + I + D SLSG + IIGR+VV+HEK DD G+ S+
Sbjct: 101 SNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKT 160
Query: 546 TGNAGGRVACGVIG 587
TGNAG R+ACG IG
Sbjct: 161 TGNAGSRLACGTIG 174
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 142 bits (345), Expect = 3e-34
Identities = 71/150 (47%), Positives = 94/150 (62%), Gaps = 4/150 (2%)
Frame = +3
Query: 147 SRAIAVLSTETXRGNITFTQVQAG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 323
+RA+AVL ET G I TQ + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 62
Query: 324 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEK 503
HFNP K HG P RHVGDLGNV + ++I L D ++L GP+ ++GR++V+H
Sbjct: 63 HFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAG 122
Query: 504 ADDYGK---SDHPDSRKTGNAGGRVACGVI 584
DD G+ +S+KTGNAG R ACGVI
Sbjct: 123 QDDLGEGVGDKAEESKKTGNAGARAACGVI 152
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 142 bits (345), Expect = 3e-34
Identities = 71/150 (47%), Positives = 94/150 (62%), Gaps = 4/150 (2%)
Frame = +3
Query: 147 SRAIAVLSTETXRGNITFTQVQAG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 323
+RA+AVL ET G I TQ + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 62
Query: 324 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEK 503
HFNP K HG P RHVGDLGNV + ++I L D ++L GP+ ++GR++V+H
Sbjct: 63 HFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAG 122
Query: 504 ADDYGK---SDHPDSRKTGNAGGRVACGVI 584
DD G+ +S+KTGNAG R ACGVI
Sbjct: 123 QDDLGEGVGDKAEESKKTGNAGARAACGVI 152
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 142 bits (345), Expect = 3e-34
Identities = 71/150 (47%), Positives = 94/150 (62%), Gaps = 4/150 (2%)
Frame = +3
Query: 147 SRAIAVLSTETXRGNITFTQVQAG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 323
+RA+AVL ET G I TQ + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 3 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 62
Query: 324 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEK 503
HFNP K HG P RHVGDLGNV + ++I L D ++L GP+ ++GR++V+H
Sbjct: 63 HFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAG 122
Query: 504 ADDYGK---SDHPDSRKTGNAGGRVACGVI 584
DD G+ +S+KTGNAG R ACGVI
Sbjct: 123 QDDLGEGVGDKAEESKKTGNAGARAACGVI 152
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 142 bits (345), Expect = 3e-34
Identities = 71/150 (47%), Positives = 94/150 (62%), Gaps = 4/150 (2%)
Frame = +3
Query: 147 SRAIAVLSTETXRGNITFTQVQAG-KVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGS 323
+RA+AVL ET G I TQ + ++G I GL PG +GFHVH+ GD + GC+S G
Sbjct: 25 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGP 84
Query: 324 HFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEK 503
HFNP K HG P RHVGDLGNV + ++I L D ++L GP+ ++GR++V+H
Sbjct: 85 HFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAG 144
Query: 504 ADDYGK---SDHPDSRKTGNAGGRVACGVI 584
DD G+ +S+KTGNAG R ACGVI
Sbjct: 145 QDDLGEGVGDKAEESKKTGNAGARAACGVI 174
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 128 bits (309), Expect = 8e-30
Identities = 67/149 (44%), Positives = 88/149 (59%), Gaps = 4/149 (2%)
Frame = +3
Query: 150 RAIAVLSTETXRGNITFTQVQAGK-VHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 326
RA+AVL G + TQ G+ +G I GL PG +GFH+H+ GD + GC S G H
Sbjct: 24 RAVAVLRGTAVFGTVWLTQKAEGEETEFEGEIKGLSPGLHGFHIHQYGDSTDGCTSAGPH 83
Query: 327 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 506
FNP +HG + V RHVGDLGNV + ++I D +SL G + +IGR++V+H
Sbjct: 84 FNPCKMNHGGRDSVVRHVGDLGNVEAGADGVAKIKFSDKVVSLFGANTVIGRSMVVHVDR 143
Query: 507 DDYGK---SDHPDSRKTGNAGGRVACGVI 584
DD G+ +S KTGNAG R ACGVI
Sbjct: 144 DDLGQGIDDKAEESLKTGNAGARAACGVI 172
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical protein
T01D3.3b protein.
Length = 1011
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 126 HHGFTTPSRAIAVLSTETXR--GNITFTQVQAGKVHVQGGITGLPPGEYGFHVHEKGDLS 299
H F + A+A+L T G TF+Q+ + + + G + LP G + +H+ GD S
Sbjct: 875 HDAFVDDTIAVAILITREGAHIGRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSS 934
Query: 300 GGCLSTGSHFN 332
GC G+ F+
Sbjct: 935 EGCSRVGAPFS 945
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 126 HHGFTTPSRAIAVLSTETXR--GNITFTQVQAGKVHVQGGITGLPPGEYGFHVHEKGDLS 299
H F + A+A+L T G TF+Q+ + + + G + LP G + +H+ GD S
Sbjct: 666 HDAFVDDTIAVAILITREGAHIGRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSS 725
Query: 300 GGCLSTGSHFN 332
GC G+ F+
Sbjct: 726 EGCSRVGAPFS 736
>U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam
protein 6, isoform c protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.2
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +1
Query: 49 PTEANXSNKNACFNSHSWLXSLWRRLIMASPRRPALLPFXPQKRLEATSHLLRFKLGRFT 228
PTE+N S + N+ S+ W + A P P LLP +KRL+ ++L K T
Sbjct: 31 PTESNVSFECLLSNADSYSSVEWFK--DAKPIVPLLLPAEKRKRLKIDHNVLHLKFADET 88
Query: 229 FREASLGCLRVNTVSTSMRRA 291
C+ N V +S A
Sbjct: 89 -DSGVYQCVASNDVGSSSSSA 108
>U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam
protein 6, isoform a protein.
Length = 964
Score = 30.7 bits (66), Expect = 2.2
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +1
Query: 49 PTEANXSNKNACFNSHSWLXSLWRRLIMASPRRPALLPFXPQKRLEATSHLLRFKLGRFT 228
PTE+N S + N+ S+ W + A P P LLP +KRL+ ++L K T
Sbjct: 221 PTESNVSFECLLSNADSYSSVEWFK--DAKPIVPLLLPAEKRKRLKIDHNVLHLKFADET 278
Query: 229 FREASLGCLRVNTVSTSMRRA 291
C+ N V +S A
Sbjct: 279 -DSGVYQCVASNDVGSSSSSA 298
>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
protein 6, isoform b protein.
Length = 1227
Score = 30.7 bits (66), Expect = 2.2
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +1
Query: 49 PTEANXSNKNACFNSHSWLXSLWRRLIMASPRRPALLPFXPQKRLEATSHLLRFKLGRFT 228
PTE+N S + N+ S+ W + A P P LLP +KRL+ ++L K T
Sbjct: 484 PTESNVSFECLLSNADSYSSVEWFK--DAKPIVPLLLPAEKRKRLKIDHNVLHLKFADET 541
Query: 229 FREASLGCLRVNTVSTSMRRA 291
C+ N V +S A
Sbjct: 542 -DSGVYQCVASNDVGSSSSSA 561
>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
protein 6, isoform d protein.
Length = 1196
Score = 30.7 bits (66), Expect = 2.2
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +1
Query: 49 PTEANXSNKNACFNSHSWLXSLWRRLIMASPRRPALLPFXPQKRLEATSHLLRFKLGRFT 228
PTE+N S + N+ S+ W + A P P LLP +KRL+ ++L K T
Sbjct: 453 PTESNVSFECLLSNADSYSSVEWFK--DAKPIVPLLLPAEKRKRLKIDHNVLHLKFADET 510
Query: 229 FREASLGCLRVNTVSTSMRRA 291
C+ N V +S A
Sbjct: 511 -DSGVYQCVASNDVGSSSSSA 530
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,811,752
Number of Sequences: 27780
Number of extensions: 286025
Number of successful extensions: 727
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3359895476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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