Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_O02
(1151 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 64 4e-11
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 42 1e-04
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 42 2e-04
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 40 9e-04
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 39 0.001
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 38 0.002
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 36 0.008
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 36 0.011
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 36 0.014
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 36 0.014
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 35 0.019
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 35 0.019
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 35 0.025
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 34 0.032
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 34 0.032
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 34 0.043
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 33 0.057
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 33 0.099
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 33 0.099
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 33 0.099
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 32 0.13
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 31 0.23
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 31 0.23
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 31 0.23
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 31 0.23
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 31 0.30
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 31 0.30
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 31 0.40
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 31 0.40
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 31 0.40
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 31 0.40
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 30 0.53
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 30 0.53
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.70
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 30 0.70
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 29 0.92
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 29 0.92
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 29 1.2
SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyc... 29 1.2
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 28 2.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 2.8
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 27 3.7
SPBC14F5.05c |sam1||S-adenosylmethionine synthetase |Schizosacch... 27 4.9
SPAC17H9.17c |mdm10||Mdm10/Mdm12/Mmm1 complex subunit Mdm10 |Sch... 27 4.9
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 27 4.9
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 27 6.5
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 27 6.5
SPAC31A2.03 |mrpl11||mitochondrial ribosomal protein subunit L11... 27 6.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 6.5
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 8.6
SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55 family|S... 26 8.6
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 64.1 bits (149), Expect = 4e-11
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Frame = +1
Query: 190 VHRIRYYNPQPTPVNCIAYNKLNKQ---------LSLARKDSSIEIWDMTHFPFLLKFIP 342
+HR R+ + P+ + +A++ + Q L++ R +IEIW+ + L +
Sbjct: 3 IHRCRFIDYTPSAITAMAFSHKSGQNDSMPNNLLLAVGRASGNIEIWNPRNDWCLKTVLY 62
Query: 343 AVKDGSVEALGWVKD----RLLTTGLGGALVEWNLEE-MCIRNTILLTGYAAWCLDVSPD 507
D S+E + W RL + G + EWNL + N G A W + + +
Sbjct: 63 GGVDRSIEGIVWSTGEEELRLFSIGFSTTITEWNLHTGKPLVNQDSNAG-AIWSIAICDE 121
Query: 508 NTLVAVGTEQGYVNLYNVENDD--IIYKKLFDKQEGRILCCKFNETSSILVTGSIN-TIR 678
+AVG + G L+++ I +K++ +Q RIL F +T LV G + I+
Sbjct: 122 TKTLAVGCDDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDF-QTKDHLVGGCADGVIK 180
Query: 679 VWNVETGHAT--TRISV--SRRGKEVIVWSLGYTRE 774
VW++ T ++ +R+ V +R+G+ ++W++ R+
Sbjct: 181 VWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRD 216
Score = 44.0 bits (99), Expect = 4e-05
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2
Query: 764 TLENNIIASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTIIQ 943
+L + I S DS G + W+G +SF H AD L + VS + + +F SG+D IQ
Sbjct: 213 SLRDGTIVSADSSGAVKFWNGKFFTLSQSFKLHLADALCLGVSANGDMVFSSGIDRKTIQ 272
Query: 944 FRK 952
+ +
Sbjct: 273 YSR 275
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 499 SPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSIN-TI 675
SPD + GTE + L+++ + Y +F E I F+ +V+GS + T
Sbjct: 369 SPDGKYLVTGTEDRQIKLWDLSTQKVRY--VFSGHEQDIYSLDFSHNGRFIVSGSGDRTA 426
Query: 676 RVWNVETGHATTRISV 723
R+W+VETG ++ +
Sbjct: 427 RLWDVETGQCILKLEI 442
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 613 ILCC-KFNETSSILVTGSINTIRVWNVETG 699
++CC KF+ L TG V++V+TG
Sbjct: 315 VVCCVKFSNNGKYLATGCNQAANVFDVQTG 344
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 487 CLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSI 666
CL SPD +A G G V LY+ + ++I + + GRIL +N S+ L T S+
Sbjct: 484 CLAYSPDGKYLACGDASGKVVLYDANSREVITSR-WAFHTGRILGMSWNAKSTHLATASL 542
Query: 667 NT-IRVWNVE 693
+T I +++VE
Sbjct: 543 DTNIHIYSVE 552
Score = 34.3 bits (75), Expect = 0.032
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 785 ASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCS 919
AS + G++ ++DG TGD++ +HK I +I+ S D + S
Sbjct: 205 ASAGADGKVYVFDGKTGDQVYEIDAHKGSIFSISWSPDSSQFVTS 249
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 770 ENNIIASGDSLGRLTLWDGNTGDEIES-FISHKADILTIAVSEDKNNLFCSGVDPTI 937
+ +A GD+ G++ L+D N+ + I S + H IL ++ + +L + +D I
Sbjct: 490 DGKYLACGDASGKVVLYDANSREVITSRWAFHTGRILGMSWNAKSTHLATASLDTNI 546
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 39.5 bits (88), Expect = 9e-04
Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 3/186 (1%)
Frame = +1
Query: 208 YNPQPTPVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKD 387
Y PV +A+ + A D + ++W H L F + D
Sbjct: 417 YKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSA 476
Query: 388 RLLTTGLGGALVEWNLEEMCIRNTILLTGYA--AWCLDVSPDNTLVAVGTEQGYVNLYNV 561
+LT W++ + + G+ + ++PD +A +G ++L+++
Sbjct: 477 YVLTGSSDKTCRLWDVHRG--HSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDI 534
Query: 562 ENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSIN-TIRVWNVETGHATTRISVSRRGK 738
I K G I F+ S++LV+G + T+R W+V + +S S G
Sbjct: 535 GTGRRI--KTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSLTGS 592
Query: 739 EVIVWS 756
V +S
Sbjct: 593 VVTPFS 598
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 39.1 bits (87), Expect = 0.001
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +1
Query: 391 LLTTGLGGALVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVEND 570
L+T L G L W+ + + ++ L G + + LVAV + + + +V+
Sbjct: 504 LVTASLDGILKFWDFNKGNLIDS-LDVGSSITHAIYQHSSDLVAVACDDFGIRIVDVQTR 562
Query: 571 DIIYKKLFDKQEGRILCCKFNETSSILVTGSIN-TIRVWNVETGHATTRIS 720
I+ ++L+ R+ F++T LVT S++ TIR W++ TGH IS
Sbjct: 563 KIV-RELWG-HSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTGHLIDSIS 611
Score = 37.5 bits (83), Expect = 0.003
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +1
Query: 412 GALVEWNLE-EMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKK 588
GAL WNL + G L +P ++AVGT G + ++N++N I+ +
Sbjct: 183 GALQIWNLRVSKRVHEFQEFFGDGITSLTQAPVLDVLAVGTISGRIVIFNLKNGSILMEF 242
Query: 589 LFDKQEGRILCCKFNETSSILVTGS--INTIRVWNV 690
KQ+G++L C F + ++ S I + W++
Sbjct: 243 ---KQDGQVLSCSFRTDGTPILASSNPIGDLSFWDL 275
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 38.3 bits (85), Expect = 0.002
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +1
Query: 487 CLDVSPD-NTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSS----IL 651
CL V+P + VA G+ V L+N + D GR+ C F S +
Sbjct: 388 CLSVNPSVPSFVATGSTDRVVKLWNTSDSSPKMVVSRDLDVGRVFTCSFTTDESTAFHLA 447
Query: 652 VTGSINTIRVWNVETGHATTRISVSRRGKEV 744
+GS +RVW+ T + SR +EV
Sbjct: 448 ASGSKGVVRVWDTATNPGVRKAFESRVTEEV 478
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 36.3 bits (80), Expect = 0.008
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 490 LDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSIN 669
+ VS D ++A ++ + L++ +++ L + G + C FN S L +GS +
Sbjct: 471 IQVSKDGRIIASASQDKTIKLWDSSTGEVV-GVLRGHRRG-VWACSFNPFSRQLASGSGD 528
Query: 670 -TIRVWNVET 696
TIR+WNV+T
Sbjct: 529 RTIRIWNVDT 538
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 761 VTLENNIIASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTI 937
V+ + IIAS + LWD +TG+ + H+ + + + L D TI
Sbjct: 473 VSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTI 531
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 490 LDVSPDNTLVAVGTEQGYVNLYNVENDDIIYK 585
LD S D +A G + V L+N+ +D +YK
Sbjct: 370 LDSSEDGVWLATGAKDNTVRLWNLNIEDNVYK 401
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +2
Query: 779 IIASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTI 937
++ASG R+ LWD N+ + F H + I + + L D T+
Sbjct: 161 VLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTV 213
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 35.9 bits (79), Expect = 0.011
Identities = 14/37 (37%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +1
Query: 592 FDKQEGRILCCKFNETSSILVTGSI-NTIRVWNVETG 699
++ G I C N++S+++V+G+ NT+R+W+V+TG
Sbjct: 48 YEGHTGAIWTCDINKSSTLMVSGAADNTMRLWDVKTG 84
Score = 28.3 bits (60), Expect = 2.1
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +1
Query: 478 AAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNE--TSSIL 651
A W D++ +TL+ G + L++V+ +YK F R+ +FNE T +
Sbjct: 54 AIWTCDINKSSTLMVSGAADNTMRLWDVKTGKQLYKWEFPTAVKRV---EFNEDDTRILA 110
Query: 652 VT----GSINTIRVWNV 690
VT G T+ V+ V
Sbjct: 111 VTEERMGYAGTVTVFRV 127
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 35.5 bits (78), Expect = 0.014
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 776 NIIASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVS 892
+II SGD+ G L +WD N + + S +K I TIAV+
Sbjct: 2355 SIIVSGDAGGNLIIWDLNRAEFVSSLSVYKLPIQTIAVN 2393
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 35.5 bits (78), Expect = 0.014
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 773 NNIIASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTI 937
NNIIA+G + LWD + I + H ++ I +S+D + + D TI
Sbjct: 186 NNIIANGGLQKDIQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATI 240
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 35.1 bits (77), Expect = 0.019
Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
Frame = +1
Query: 229 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFL-LKFIPAVKDGSVEALGWVKDRLLTTG 405
+N I YN+ + L+ DS + +WD F ++ + KD SV ++ + ++T
Sbjct: 101 INTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPIQVLADAKD-SVSSIDIAEHLIVTGS 159
Query: 406 LGGALVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYK 585
G L +++ + + + + + S + + + ++L + E I+
Sbjct: 160 TDGTLRTYDIRKGTLSSDYF--SHPITSVKTSKSASFSLISSLNSSIHLLDQETGKILKS 217
Query: 586 KLFDKQEGRILCCKFNETSSILVTGSIN-TIRVWNVETGHATTRISV 723
+ K + FN++ +I+ +GS + + +W++E T SV
Sbjct: 218 YIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDLENETQITSTSV 264
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 809 LTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTI 937
+ +WD NTG H A I TI +ED + L D +
Sbjct: 80 IQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKV 122
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 35.1 bits (77), Expect = 0.019
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 809 LTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTI 937
+ LWD G+ F+ H +D+L++++S D + D TI
Sbjct: 87 IRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTI 129
Score = 34.3 bits (75), Expect = 0.032
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Frame = +1
Query: 436 EEMCIRNTILLTGYAAWC--LDVSPDNT-LVAVGTEQGYVNLYNVENDDIIYKKLFDKQE 606
E++ +R T L G++ W L +P+N ++ G+ + L+N+ DD+ Y +
Sbjct: 3 EQLVLRAT--LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLT 60
Query: 607 GR---ILCCKFNETSSILVTGSIN-TIRVWNVETGHAT 708
G + C + S ++ S + TIR+W++E G T
Sbjct: 61 GHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECT 98
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 34.7 bits (76), Expect = 0.025
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +2
Query: 782 IASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTIIQFRKIR 958
I +G G++ +WD N+G I +F H + + + S+ N LF S +D ++ + IR
Sbjct: 354 IITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIR 412
Score = 31.9 bits (69), Expect = 0.17
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 PVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKD--RLLT 399
PV+ +++N L+ D ++ IWD+ +++ +P D V +L + D +
Sbjct: 469 PVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSD--VLSLAFHPDGKEVCV 526
Query: 400 TGLGGALVEWNLEE 441
L G L WN++E
Sbjct: 527 ASLDGQLTFWNVQE 540
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 34.3 bits (75), Expect = 0.032
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 782 IASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTI 937
+AS D G + +WD + ++ SF+ H + + +++ S D L G D +
Sbjct: 544 LASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDV 595
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = +1
Query: 199 IRYYNPQPTPVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGW 378
+R +N +PV+ + + L+ A + I++WD+ + F+ V +L +
Sbjct: 522 VRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVK--HSSIVYSLSF 579
Query: 379 VKDRLLTTGLGGALVEWNLEEMCIRNTI 462
D + GGA + N ++ RN +
Sbjct: 580 SYDNKILVS-GGADTDVNFWDLTYRNNL 606
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 34.3 bits (75), Expect = 0.032
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 475 YAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILV 654
Y C+ +SPD +A + VN+++ E+ + ++ + + C F+ S+ LV
Sbjct: 217 YITRCV-LSPDVKHLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLV 275
Query: 655 TGSINTI-RVWNVETGHATTRIS 720
T S + + R+W + +G + S
Sbjct: 276 TASSDHVARLWELSSGETIRQYS 298
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 33.9 bits (74), Expect = 0.043
Identities = 29/161 (18%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Frame = +1
Query: 229 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVK-DRLLTTG 405
V C++ + + ++ + D +I+IW F + + + W + L +
Sbjct: 57 VTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYR--GISQVKWATGSKYLASA 114
Query: 406 LGGALVE-WNLEEMC-IRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDII 579
+ W+ E+ C +R T Y + +D +P TL+ G+ V ++N+++ +
Sbjct: 115 SDDKTIRIWDFEKRCSVRCLKGHTNYVS-SIDFNPLGTLLVSGSWDETVRIWNLQDGTCL 173
Query: 580 YKKLFDKQEGRILCCKFNETSSILVTGSINTI-RVWNVETG 699
++ I+ + ++ T S + + R+W+V +G
Sbjct: 174 --RMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSG 212
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 33.5 bits (73), Expect = 0.057
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 782 IASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTI 937
+ASG G + +WD G + SFI H A I ++ D N+L+ D ++
Sbjct: 509 VASGTVDGLIRIWDLRIGLPVRSFIGHTAPISSLQF--DSNHLYSGSYDNSV 558
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 32.7 bits (71), Expect = 0.099
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 505 DNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSIN-TIRV 681
D+ + V T +N+Y+ + +I + ++ EG + F LVTGS + T+RV
Sbjct: 415 DDDKIIVSTCSPRINIYDTKTGVLI--RSLEEHEGDVWT--FEYVGDTLVTGSTDRTVRV 470
Query: 682 WNVETG 699
W++ TG
Sbjct: 471 WDLRTG 476
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.099
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Frame = +1
Query: 394 LTTGLGGA-LVEW-NLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVEN 567
+TTGLG ++EW +L+ + I +C++ SPDN +A+G +L++ +
Sbjct: 169 MTTGLGTVQIMEWPSLKRVY---DIKAHNSNCFCIEFSPDNRHLAIGGADAITSLWDPQ- 224
Query: 568 DDIIYKKLFDKQEGRILCCKFNETSSILVTGSINT-IRVWNVETGHATTRI 717
++I ++ + + I F+ S L +GS + + + + +TG +I
Sbjct: 225 -ELICERSITRMDYPIRTLSFSYDSRYLASGSEDRYVDIADTKTGDQIWKI 274
Score = 31.5 bits (68), Expect = 0.23
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 385 DRLLTTGLGGALVE-WNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNV 561
+R L G A+ W+ +E+ +I Y L S D+ +A G+E YV++ +
Sbjct: 206 NRHLAIGGADAITSLWDPQELICERSITRMDYPIRTLSFSYDSRYLASGSEDRYVDIADT 265
Query: 562 ENDDIIYK 585
+ D I+K
Sbjct: 266 KTGDQIWK 273
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 32.7 bits (71), Expect = 0.099
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 767 LENNIIASG--DSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTI 937
+ +N+ ASG D LG + WD TG++I HK I+ I S D + G+D +
Sbjct: 72 VHSNLCASGGGDDLGYI--WDITTGEQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQV 128
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 32.3 bits (70), Expect = 0.13
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Frame = +1
Query: 229 VNCIAYNKLNKQLSLARKDSSIEIWDMT---HFPFLLKFIPAVKDGSVEALGWVKDRLLT 399
V CIA++ L+ +D S+ IW+ T F L +D V +D L++
Sbjct: 381 VKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDLLVS 440
Query: 400 TGLGGALVEWNLEEMCIRNTILLTGY--AAWCLDVSPDNTLVAVGTEQGYVNLY 555
++ W + T L G+ W L SP+ +A G V L+
Sbjct: 441 GSYDNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLW 494
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 31.5 bits (68), Expect = 0.23
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 487 CLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSI 666
C+ SP + +A GTE+G + ++++++ +IY F + KF+ +L T S
Sbjct: 81 CVQSSPCGSWLAAGTEKGNLYIWSLKSGALIY--FFRAHYQPLTILKFSNDGMVLFTASN 138
Query: 667 N-TIRVWNVET 696
+ + W + T
Sbjct: 139 DGDVFAWLIST 149
Score = 27.9 bits (59), Expect = 2.8
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 667 NTIRVWNVETGHATTRISV 723
NTIR+W+V TG+ T I++
Sbjct: 199 NTIRIWDVSTGNLLTTIAL 217
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 31.5 bits (68), Expect = 0.23
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +1
Query: 391 LLTTGLGGALVEWNLEEMCI-RNTILLTGYAA--WCLDVSPDNTLVAVGTEQGYVNLYNV 561
+L G + +N+E+ + R + G + +CLD P N +A+G++ G VN+Y++
Sbjct: 364 MLVLSYGAEVWHFNVEQRSVVRRWQVQDGVSTTHFCLD--PSNKYLAIGSKSGIVNIYDL 421
Query: 562 E--NDDIIYKKL--FDKQEGRILCCKFNETSSILVTGS 663
+ N D K + D I F++ S +L S
Sbjct: 422 QTSNADAAPKPVTTLDNITFSINSMSFSQDSQVLAIAS 459
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 31.5 bits (68), Expect = 0.23
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +2
Query: 710 HVYQ*ADGVKKLLFGPLVTLENNIIASGDSLGRLTLWDGNTGDEIESFISHKADILTIAV 889
H + GV L P TL+ + A D++ R+ WD T + HK+ + ++AV
Sbjct: 242 HYHGHLSGVYALKLHP--TLDVLVTAGRDAVARV--WDMRTRQNVHVLSGHKSTVASLAV 297
Query: 890 SEDKNNLFCSGVDPTI 937
E + +D TI
Sbjct: 298 QEFDPQVVTGSMDSTI 313
Score = 26.2 bits (55), Expect = 8.6
Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 1/165 (0%)
Frame = +1
Query: 229 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKDRLLTTGL 408
V C+ N+ D +I+IWD+ L + A+ L + G
Sbjct: 166 VRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGE 225
Query: 409 GGALVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKK 588
+ W+LE + + L + P ++ ++++ ++
Sbjct: 226 DKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVH-- 283
Query: 589 LFDKQEGRILCCKFNETSSILVTGSI-NTIRVWNVETGHATTRIS 720
+ + + E +VTGS+ +TIR+W++ G T ++
Sbjct: 284 VLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLT 328
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.23
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 2/127 (1%)
Frame = +1
Query: 391 LLTTGLGGALVEWNLEEMCIRNTILLTGYAAWCLDV--SPDNTLVAVGTEQGYVNLYNVE 564
LL+ L+ W+L + W + SP +A G + +Y+
Sbjct: 36 LLSASTNDVLLVWDLHTS--NKVAFFEAPSVWIMTCAFSPSTKSIAAGGLNNFCVVYDTS 93
Query: 565 NDDIIYKKLFDKQEGRILCCKFNETSSILVTGSINTIRVWNVETGHATTRISVSRRGKEV 744
D +L G + CCK+ + +L T W++E A ISV +G E+
Sbjct: 94 VPDADPVELVG-HAGFVSCCKYVDDGHLLTGSGDKTCMFWDIEQAKA---ISV-LKGHEM 148
Query: 745 IVWSLGY 765
+ SL +
Sbjct: 149 DIVSLDF 155
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 31.1 bits (67), Expect = 0.30
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 770 ENNIIASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTI 937
+ IA+ + LWDG TG + + H A + A S D L S D T+
Sbjct: 400 DGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTL 455
Score = 27.9 bits (59), Expect = 2.8
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 490 LDVSPDNT--LVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGS 663
L ++PD+ L+A G++ V ++NV+ +++ I C ++ + I +
Sbjct: 231 LHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFT--LSGHTAPITCVRWGGQNWIYSSSY 288
Query: 664 INTIRVWNVETG 699
TIR+W+ + G
Sbjct: 289 DKTIRIWDAKDG 300
Score = 26.6 bits (56), Expect = 6.5
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Frame = +1
Query: 229 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKDR--LLTT 402
VN +++ + ++ A DSS+ +WD FL V +V W D L+++
Sbjct: 392 VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHV--AAVYQCAWSTDSRLLVSS 449
Query: 403 GLGGALVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYN 558
L W++ ++ + + +D SPD VA G V +++
Sbjct: 450 SQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 31.1 bits (67), Expect = 0.30
Identities = 34/174 (19%), Positives = 73/174 (41%), Gaps = 5/174 (2%)
Frame = +1
Query: 229 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKDR-LLTTG 405
V C+ Y+ ++ + KD ++ +WD+ L K GSV L + + R LL +G
Sbjct: 224 VYCVQYD--DEIMVSGSKDRTVSVWDVNSRFILYKLYG--HSGSVLCLDFCRRRNLLVSG 279
Query: 406 LGGA-LVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVE--NDDI 576
+ ++ W+ + R + G+ L V + + ++ ++ +
Sbjct: 280 SSDSTIIIWDWQNR--RPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAE 337
Query: 577 IYKKLFDKQEGRILCCKFNETSSILVTGSIN-TIRVWNVETGHATTRISVSRRG 735
+ + +++ + ++VT S + T+R W++ TGH I +RG
Sbjct: 338 ACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRG 391
Score = 30.3 bits (65), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 776 NIIASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPT 934
N++ SG S + +WD ++ + H ++L + VSE N + S D T
Sbjct: 274 NLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSE--NYIISSSRDHT 324
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 586 KLFDKQEGRILCCKFNETSSILVTGSINTIRVWNVETGHATTRISVSRRGK 738
++ E I +FN+ I+ G T+R+WN TG + SR +
Sbjct: 423 RMLQGHEDLIRTVRFND-EKIVSGGYDGTVRIWNFNTGEQHCVLHNSRNSR 472
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 30.7 bits (66), Expect = 0.40
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 487 CLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSI 666
CL ++ +NT + G G+V +YN+ + +++ K G IL + S LV G
Sbjct: 255 CLAMNSENTRLLSGGLDGHVKIYNISDWKVVHGM---KYSGPILSMGLSPDSCNLVVGMS 311
Query: 667 N 669
N
Sbjct: 312 N 312
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 30.7 bits (66), Expect = 0.40
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Frame = +1
Query: 475 YAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKK------------LFDKQEGRIL 618
++AW L VSP L + + VNL+++ + +K+ + + E I
Sbjct: 47 HSAWGLAVSPLRIL-GISSNSHNVNLFHLSPEFKRFKEDYHSPWFRQETLVLEGHEHNIP 105
Query: 619 CCKFNETSSILVTGSIN-TIRVWNV 690
C FN + ++L++GSI+ ++++W++
Sbjct: 106 CITFNSSGTLLLSGSIDRSLQIWDI 130
Score = 29.9 bits (64), Expect = 0.70
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 229 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKF 336
+ CI +N L D S++IWD+T L KF
Sbjct: 104 IPCITFNSSGTLLLSGSIDRSLQIWDITSLSCLCKF 139
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 30.7 bits (66), Expect = 0.40
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -3
Query: 891 DTAIVKMSAL*LINDSISSPVLPSHSVSRPKLSPDAIILFSSVTKGPNNNFFTPSAY*YT 712
D + +L +ND S + PS + PK PDA + ++ +N F TPS+ +
Sbjct: 107 DQKVCNSDSLSELNDFTKSLIQPSMLMCEPKEKPDASSI-NTNRSSSDNGFLTPSSSPRS 165
Query: 711 CSC 703
SC
Sbjct: 166 PSC 168
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 30.7 bits (66), Expect = 0.40
Identities = 41/189 (21%), Positives = 76/189 (40%), Gaps = 10/189 (5%)
Frame = +1
Query: 193 HRIRYYNPQPTPVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEAL 372
H+I + V +A+ QL+ D+ ++IWD + KF + +V+A+
Sbjct: 295 HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR--SSIPKFTKTNHNAAVKAV 352
Query: 373 GWV--KDRLLTTGLGGALVE----WNLEEMCIRNTILLTGYAAWCLDVSPDN--TLVAVG 528
W + LL TG GG + + WN NT+ G L SP + + G
Sbjct: 353 AWCPWQSNLLATG-GGTMDKQIHFWNAATGARVNTV-DAGSQVTSLIWSPHSKEIMSTHG 410
Query: 529 TEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVT-GSINTIRVWNVETG-H 702
+++++ + + + + R+L + IL T S ++ W V G H
Sbjct: 411 FPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 470
Query: 703 ATTRISVSR 729
I +++
Sbjct: 471 VKRPIPITK 479
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 30.3 bits (65), Expect = 0.53
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = +1
Query: 400 TGLGGALVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDII 579
T + G + W+ C + + G C+D SP+ + G + G + L + E +
Sbjct: 121 TSVDGRIAVWDNPSDCKISELDTKGKFGLCIDYSPNGRFIVSGHQTGQLFLISTETGRLF 180
Query: 580 YKKLFDKQEGRILCCKFNETSSIL-VTGSINTIRVWNVETG 699
+ + + F+ S++L G I +++V +G
Sbjct: 181 H--VLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSG 219
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 238 IAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKDRLLTTG 405
+A+N + L A + I+IWD+ + + DG++ A+ W K+ + G
Sbjct: 235 VAFNPVGDLLLSADVEGKIKIWDIDTMECI--STQSETDGAIWAVAWYKNGFIVAG 288
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 30.3 bits (65), Expect = 0.53
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +2
Query: 791 GDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVD 928
G + G++TLW ++ + ++H+ + +AV+ D + +G D
Sbjct: 241 GHANGQVTLWSPSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTAGAD 286
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 29.9 bits (64), Expect = 0.70
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 836 DEIESFISHKADILTIAVSEDKNNLFCSGVDPTIIQFRKIR 958
+E ESF K + + +S++K L C DP+I FR ++
Sbjct: 824 EESESFAVSKKVLELVRISKNKEALICFTKDPSIEAFRSLQ 864
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 29.9 bits (64), Expect = 0.70
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Frame = +1
Query: 274 ARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKDRLLTT-GLGGALVEWNLEEMCI 450
A ++ IWD + + KF V + + +L + G+ ++V ++L
Sbjct: 163 ATSGENVSIWDYSRDTPVTKFEWGADTLPVVKFNYTETSVLASAGMDRSIVIYDLRTSSP 222
Query: 451 RNTILLTGYAAWCLDVSPDNTLVAV-GTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCK 627
T L+T + +P V G+E + +Y++ N ++ ++
Sbjct: 223 L-TKLITKLRTNSISWNPMEAFNFVAGSEDHNLYMYDMRNLKRALH-VYKDHVSAVMSVD 280
Query: 628 FNETSSILVTGSIN-TIRVWNVETGHA 705
F+ T V+GS + TIR++NV GH+
Sbjct: 281 FSPTGQEFVSGSYDKTIRIYNVREGHS 307
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 29.5 bits (63), Expect = 0.92
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 538 GYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSIN-TIRVWNVETGHAT 708
G + ++N ++ +L +EG + K +E + LV+GSI+ T+RVWN+E T
Sbjct: 371 GTIQIHNAITG-VLEARLEGHKEG-VWAVKIHENT--LVSGSIDKTVRVWNIEKAKCT 424
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 29.5 bits (63), Expect = 0.92
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +2
Query: 776 NIIASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSG---VDPTIIQF 946
N++ASG + L +WD + SF +H A + I S + + SG D TI +
Sbjct: 387 NLLASGGNDNALMVWDKFEEKPLYSFHNHIAAVKAITWSPHQRGILASGGGTADRTIKLW 446
Query: 947 RKIRXSLTLQMXKG 988
R S+ + G
Sbjct: 447 NTQRGSMLHNIDTG 460
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 29.1 bits (62), Expect = 1.2
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 18/206 (8%)
Frame = +1
Query: 211 NPQPTPVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGW--VK 384
+P V+ +AY+ L++AR + +EIW+ + DG + + W +
Sbjct: 198 SPTTYEVSSLAYSSDGGFLAIARVNGFVEIWNRKTKNNRCDY-KFHHDGDISCMAWSPIN 256
Query: 385 DRLLTTGLGGALVEWNLEEMCIR--NTILLTGYAAWC-LDVSPDNTLVAVGTEQGYVNLY 555
LL G G + + + +R +TI C L+ + D T A G V ++
Sbjct: 257 WTLLVGGSTGNIYVYRRTKSMMRRVHTIKKVHQEQVCGLEWNYDGTQFASGGNDNLVCIF 316
Query: 556 NVENDDIIYKKLFDKQEGRILC---CKFNETSSILVTGS-------INTI---RVWNVET 696
++ D + KK + + C + ++ + TGS +T R+ ++
Sbjct: 317 DI--DSLENKKFYWIHLAAVKALAFCPWQKSLLAVGTGSNDQQIYFYDTFRGHRIHSLFC 374
Query: 697 GHATTRISVSRRGKEVIVWSLGYTRE 774
G T + SRR KE +SLGY+ E
Sbjct: 375 GAQVTSVIWSRRYKE-FCYSLGYSPE 399
>SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 364
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +1
Query: 604 EGRILCCKFNETSSILVTGSIN--TIRVWNVETGHATTRISVSRRG-KEVIVWSLGYTRE 774
+ I C ++T S + + S N IR+WN ETG +I RRG + V L ++ +
Sbjct: 175 DSEISCLGISKTGSKIASSSTNGTLIRIWNSETGE---KICEFRRGYQHTAVCQLAFSPD 231
Query: 775 Q 777
+
Sbjct: 232 E 232
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 782 IASGDSLGRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVDPTIIQFRKIRX 961
+ASG + L +WD + + F H A + I S + + SG TI + I
Sbjct: 264 LASGGNDNNLFVWDYRSSRPLHKFEEHTAAVKAIGWSPHQRGILASG-GGTIDRCLTIHN 322
Query: 962 SLT 970
+LT
Sbjct: 323 TLT 325
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 2.8
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = -3
Query: 927 STPLQNKLFLSSDTAIVKMSAL*LINDSISSPVLPSHSVSRPKLSPDAIILFSSVTKGPN 748
STP+ + L+S TAI +AL SS VL S S P S A+ + +T
Sbjct: 693 STPITSSSVLNSSTAITSSTALNTSTPITSSSVLNS---STPITSSTALNTSTPITSSSV 749
Query: 747 NNFFTP 730
N TP
Sbjct: 750 LNSSTP 755
Score = 26.6 bits (56), Expect = 6.5
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = -3
Query: 927 STPLQNKLFLSSDTAIVKMSAL*LINDSISSPVLPSHSVSRPKLSPDAIILFSSVTKGPN 748
STP+ + L+S TAI +AL SS VL S S P S + + +T
Sbjct: 1005 STPITSSSVLNSSTAITSSTALNTSTPITSSSVLNS---STPITSSTVVNTSTPITSSTV 1061
Query: 747 NNFFTP 730
N TP
Sbjct: 1062 VNSSTP 1067
Score = 26.6 bits (56), Expect = 6.5
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = -3
Query: 939 IMVGSTPLQNKLFLSSDTAIVKMSAL*LINDSISSPVLPSHSVSRPKLSPDAIILFSSVT 760
I+ STP+ + L+S TAI S L SS +L S S P S + + +T
Sbjct: 3101 IVNSSTPITSSSVLNSSTAITSSSILNSSTPITSSSILNS---STPITSSTVVNSSTPIT 3157
Query: 759 KGPNNNFFTP 730
N TP
Sbjct: 3158 SSTTLNTSTP 3167
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 27.5 bits (58), Expect = 3.7
Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Frame = +1
Query: 394 LTTGLGGALVEWNLEEM-CIRNTILLTGYAAWCLDV--SPDNTLVAVGTEQGYVNLYNVE 564
LTT + G + W+ + + + G W + SPD + +G G V YN+
Sbjct: 368 LTTSIDGVMNVWDHRMVDSVLKYPVPKGVPPWAMSACWSPDGNNIYIGRRNGIVEEYNIH 427
Query: 565 NDDIIYKKL-FDKQEGRILCCKFNETSSILVTGSINTIRVWNVET 696
+ + L G + LV S + IR++++++
Sbjct: 428 SGKEPVRSLKMPLDSGPVSNVYSMPNGRHLVISSFDNIRLYDLQS 472
>SPBC14F5.05c |sam1||S-adenosylmethionine synthetase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 382
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 214 PQPTPVNCIAYNKLNKQLSLARKDSSI 294
P+ P+ + +KLN +S+AR+D S+
Sbjct: 134 PEKLPLTILLAHKLNAAMSVARRDGSL 160
>SPAC17H9.17c |mdm10||Mdm10/Mdm12/Mmm1 complex subunit Mdm10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 370
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 655 TGSINTIR-VWNVETGHATTRISVSRRGKEVIVWSLGYTREQYY 783
+G++ +R +WN+ T+I++ + + WSLG+ E YY
Sbjct: 185 SGAMLGVRGLWNLNYRELNTKINMENKAPSNMRWSLGF--ETYY 226
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/64 (21%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 508 NTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSIN-TIRVW 684
N +++V + GYV ++ + + Y K F +L + ++ + +TG+ + +++V+
Sbjct: 59 NYILSVSYD-GYVKFWHKTPNGVEYIKEFHAHNAMLLSAELSQDERLFITGADDKSLKVF 117
Query: 685 NVET 696
+VE+
Sbjct: 118 DVES 121
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 26.6 bits (56), Expect = 6.5
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 803 GRLTLWDGNTGDEIESFISHKADILTIAVSEDKNNLFCSGVD 928
GR+ LWD G ++ F H + IA LF SG D
Sbjct: 33 GRIQLWDYRMGTLLDRFDGHDGPVRGIAF-HPTQPLFVSGGD 73
Score = 26.2 bits (55), Expect = 8.6
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +1
Query: 502 PDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSINTIRV 681
P L G + VN++N ++ +++ R+ C +E IL TIR+
Sbjct: 63 PTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRV-CTFHHEYPWILSCSDDQTIRI 121
Query: 682 WN 687
WN
Sbjct: 122 WN 123
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +1
Query: 229 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKD 387
V+C + +N Q A + S I + + PF L+ D L W+ D
Sbjct: 587 VDCFKKHSVNSQKKTAPEVSPISVTLIEQIPFFLQKRDISDDSKDAVLSWLSD 639
>SPAC31A2.03 |mrpl11||mitochondrial ribosomal protein subunit
L11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3
Query: 804 PKLSPDAIILFSSVTKGPNN 745
PKLSP+AI F SV KG N
Sbjct: 129 PKLSPEAIRGFMSVLKGYQN 148
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 746 LFGPLV--TLENNIIASGDSLGRLTLWD 823
+ GPL L+ N++ASGD+ G + +WD
Sbjct: 119 ILGPLDFNRLQPNLLASGDNKGDVWVWD 146
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 26.2 bits (55), Expect = 8.6
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = -1
Query: 539 PCSVPT-----ATNVLSGLTSRHQAAYPVNNIVFLIHISSRFHSTNAPPNPVVSSLSFTQ 375
P S+PT A N + TSR A Y ++ IH S PP + S++S Q
Sbjct: 458 PESLPTPLLGRAVNTTAFPTSRQNAYYNDPWNLYFIHFSKLSPLRFTPPGILTSTISLGQ 517
Query: 374 P 372
P
Sbjct: 518 P 518
>SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 361
Score = 26.2 bits (55), Expect = 8.6
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 767 LENNII-ASGDSLGRLTLWDGNT-GDEIESFISHKADILTIAVSEDKNNLFCSG 922
+EN+++ A+GD G +++WD T G I + H I +I+ E++ + SG
Sbjct: 114 IENDMVFATGDDNGCVSVWDKRTEGGIIHTHNDHIDYISSISPFEERYFVATSG 167
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,263,861
Number of Sequences: 5004
Number of extensions: 87162
Number of successful extensions: 380
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 615584238
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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