Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_O01
(1339 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 45 0.004
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 41 0.084
UniRef50_O60610 Cluster: Protein diaphanous homolog 1; n=43; Eut... 41 0.084
UniRef50_A0CFX0 Cluster: Chromosome undetermined scaffold_177, w... 40 0.19
UniRef50_Q4T4L4 Cluster: Chromosome undetermined SCAF9593, whole... 39 0.34
UniRef50_A5B0K8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.59
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 37 1.0
UniRef50_Q5B8U8 Cluster: Putative uncharacterized protein; n=1; ... 37 1.0
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 37 1.4
UniRef50_UPI0000DB7674 Cluster: PREDICTED: hypothetical protein;... 36 1.8
UniRef50_Q8L4A1 Cluster: Proline-rich protein-like; n=2; Oryza s... 36 1.8
UniRef50_Q7SFA3 Cluster: Predicted protein; n=1; Neurospora cras... 36 2.4
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 36 3.2
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 36 3.2
UniRef50_A2DM28 Cluster: Diaphanous, putative; n=1; Trichomonas ... 35 5.5
UniRef50_A0DA74 Cluster: Chromosome undetermined scaffold_43, wh... 35 5.5
UniRef50_Q15428 Cluster: Splicing factor 3A subunit 2; n=69; Euk... 35 5.5
UniRef50_UPI000155550B Cluster: PREDICTED: similar to Striated m... 34 7.3
UniRef50_UPI0000F205BB Cluster: PREDICTED: similar to formin 2; ... 34 7.3
UniRef50_A1L2E9 Cluster: Putative uncharacterized protein; n=3; ... 34 7.3
UniRef50_Q3W1M0 Cluster: Putative uncharacterized protein; n=1; ... 34 7.3
UniRef50_Q41645 Cluster: Extensin; n=1; Volvox carteri|Rep: Exte... 34 7.3
UniRef50_Q9VRM2 Cluster: CG10625-PB, isoform B; n=5; Fungi/Metaz... 34 7.3
UniRef50_A0CS42 Cluster: Chromosome undetermined scaffold_26, wh... 34 7.3
UniRef50_Q99954 Cluster: Submaxillary gland androgen-regulated p... 34 7.3
UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT prote... 34 9.6
UniRef50_Q42421 Cluster: Chitinase; n=1; Beta vulgaris subsp. vu... 34 9.6
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 34 9.6
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 45.2 bits (102), Expect = 0.004
Identities = 23/33 (69%), Positives = 23/33 (69%)
Frame = +2
Query: 437 LRSVXXLRRXVSPHSKGEIRXXTESXDNAGXNM 535
LRSV LRR VS HSK IR TES DNAG NM
Sbjct: 27 LRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 40.7 bits (91), Expect = 0.084
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -3
Query: 557 PXAXLXVTCXFLRYPXILXXTVFPPLSXXIPXSAXXRPS 441
P +TC F YP IL TV PPLS P +A RPS
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERPS 57
>UniRef50_O60610 Cluster: Protein diaphanous homolog 1; n=43;
Euteleostomi|Rep: Protein diaphanous homolog 1 - Homo
sapiens (Human)
Length = 1248
Score = 40.7 bits (91), Expect = 0.084
Identities = 29/89 (32%), Positives = 31/89 (34%), Gaps = 1/89 (1%)
Frame = +1
Query: 676 IPXRFPLEAPXGXPSXSE-PGRVXXITXPXXPPFXXAXXXXXVPHPRXGXXTFRWXXRPX 852
IP PL G PS S PG P PP + P P G P
Sbjct: 630 IPPPPPLPEGVGIPSPSSLPGGT---AIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPL 686
Query: 853 PXPXGLPXPPKPRXG*TPXPXGPPXXRGP 939
P G+P PP P G P PP GP
Sbjct: 687 PGEAGMPPPPPPLPGGPGIPPPPPFPGGP 715
>UniRef50_A0CFX0 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1328
Score = 39.5 bits (88), Expect = 0.19
Identities = 22/68 (32%), Positives = 26/68 (38%)
Frame = +1
Query: 736 RVXXITXPXXPPFXXAXXXXXVPHPRXGXXTFRWXXRPXPXPXGLPXPPKPRXG*TPXPX 915
++ + P PP + P P G T P P P G P PP P G P P
Sbjct: 783 QISQVPPPPPPPGTISVSALAPPPPPLGAKTGASSPAPPPPPGG-PKPPGPPPGGAPPPP 841
Query: 916 GPPXXRGP 939
PP R P
Sbjct: 842 PPPGPRPP 849
>UniRef50_Q4T4L4 Cluster: Chromosome undetermined SCAF9593, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF9593,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 335
Score = 38.7 bits (86), Expect = 0.34
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = +1
Query: 847 PXPXPXGLPXPPKPRXG*TPXPXGPPXXRGPXXXSSXV 960
P P P GLP PP PR G P P GPP P S+ V
Sbjct: 106 PPPAPPGLPPPP-PRTGAPPRPLGPPMALFPPPLSANV 142
>UniRef50_A5B0K8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 324
Score = 37.9 bits (84), Expect = 0.59
Identities = 25/79 (31%), Positives = 25/79 (31%)
Frame = +1
Query: 703 PXGXPSXSEPGRVXXITXPXXPPFXXAXXXXXVPHPRXGXXTFRWXXRPXPXPXGLPXPP 882
P P PGR P PP P P G W P P P P PP
Sbjct: 13 PYAPPPPGPPGRPPPPYDPFAPP--PPPGPPGPPGP-PGPPPPSWHHPPPPDPFAPPPPP 69
Query: 883 KPRXG*TPXPXGPPXXRGP 939
P P P PP GP
Sbjct: 70 GPPGPPPPGPYSPPAPPGP 88
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 37.1 bits (82), Expect = 1.0
Identities = 20/36 (55%), Positives = 20/36 (55%)
Frame = +3
Query: 582 RXXFPIGSAPXTSIXKIDAQXIRGXXRXDXXXTXAF 689
R F IGSAP TSI KIDAQ G R D T F
Sbjct: 13 RCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRF 48
>UniRef50_Q5B8U8 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 432
Score = 37.1 bits (82), Expect = 1.0
Identities = 23/81 (28%), Positives = 28/81 (34%)
Frame = +1
Query: 676 IPXRFPLEAPXGXPSXSEPGRVXXITXPXXPPFXXAXXXXXVPHPRXGXXTFRWXXRPXP 855
+P P P G P G V T P PPF + +P R P P
Sbjct: 127 VPTGKPTPIPTGKPRPVPTGPVNNGTAPPNPPFQNSTSPPLIPTTRPVPVPPGSSPAPVP 186
Query: 856 XPXGLPXPPKPRXG*TPXPXG 918
P +P P +P TP G
Sbjct: 187 VPVPVPSPGQPEQPGTPAAPG 207
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 36.7 bits (81), Expect = 1.4
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = +3
Query: 573 RPPRXXFPIGSAPXTSIXKIDAQXIRGXXRXD 668
RP R F IGSAP TSI K DAQ G R D
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQD 109
>UniRef50_UPI0000DB7674 Cluster: PREDICTED: hypothetical protein;
n=2; Eumetazoa|Rep: PREDICTED: hypothetical protein -
Apis mellifera
Length = 441
Score = 36.3 bits (80), Expect = 1.8
Identities = 31/103 (30%), Positives = 32/103 (31%)
Frame = +1
Query: 679 PXRFPLEAPXGXPSXSEPGRVXXITXPXXPPFXXAXXXXXVPHPRXGXXTFRWXXRPXPX 858
P R P P P S P IT P PP P P R P P
Sbjct: 197 PTRPPPTGPTYLPP-SPPVTHPPITRPPSPPSPPVTRPPSPPSP----PITRPPSPPSPP 251
Query: 859 PXGLPXPPKPRXG*TPXPXGPPXXRGPXXXSSXVXKPXRXXXP 987
P PP P P P PP R P S V +P P
Sbjct: 252 ITRPPSPPSPPITRPPSPPSPPVTRPPSPPSPPVTRPPSPPSP 294
>UniRef50_Q8L4A1 Cluster: Proline-rich protein-like; n=2; Oryza
sativa|Rep: Proline-rich protein-like - Oryza sativa
subsp. japonica (Rice)
Length = 252
Score = 36.3 bits (80), Expect = 1.8
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +1
Query: 805 HPRXGXXTFRWXXRPXPXPXGLPXPPKPRXG*TPXPXGP-PXXRGPXXXSSXVXKPXR 975
+ + G F +P P P P PPKP+ G P P P P + P KP +
Sbjct: 145 YKKCGDKCFHHGPKPGPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPK 202
>UniRef50_Q7SFA3 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 1109
Score = 35.9 bits (79), Expect = 2.4
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +1
Query: 844 RPXPXPXGLPXPPKPRXG*TPXPXGPPXXRGPXXXSSXVXKPXRXXXPXXLP 999
R P GLP PP PR G P P GP GP P R P P
Sbjct: 357 RHGPPTHGLPHPPAPRTG-APGPRGPGPHPGPHPGPPRQGPPYRGPMPHQGP 407
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 35.5 bits (78), Expect = 3.2
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 346 VXSALMNXPXXGEXXFAYWALF 411
V +ALMN P GE FAYWALF
Sbjct: 23 VPAALMNRPTRGERRFAYWALF 44
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 35.5 bits (78), Expect = 3.2
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = +3
Query: 576 PPRXXFPIGSAPXTSIXKIDAQXIRGXXRXDXXXTXAF 689
P + F IGSAP TSI K DAQ G R D T F
Sbjct: 47 PRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRF 84
>UniRef50_A2DM28 Cluster: Diaphanous, putative; n=1; Trichomonas
vaginalis G3|Rep: Diaphanous, putative - Trichomonas
vaginalis G3
Length = 620
Score = 34.7 bits (76), Expect = 5.5
Identities = 31/101 (30%), Positives = 33/101 (32%), Gaps = 4/101 (3%)
Frame = +1
Query: 697 EAPXGXPSXSEPGRVXXITXPXXPPFXXAXXXXXVPHPRXGXXTFRWXXRPXPXPXG--- 867
EAP P S PG P PP A P P G P P P G
Sbjct: 497 EAPSAPPPPSAPG------VPPAPPLPGAGVPPPPPPPGAGAPP------PPPPPAGGAP 544
Query: 868 -LPXPPKPRXG*TPXPXGPPXXRGPXXXSSXVXKPXRXXXP 987
P PP P+ G P P PP R P + P P
Sbjct: 545 PPPPPPPPKGGAPPPP--PPPARAPPPPAGTPPPPAAAPAP 583
>UniRef50_A0DA74 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_43, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1401
Score = 34.7 bits (76), Expect = 5.5
Identities = 25/83 (30%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Frame = +1
Query: 700 APXGXPSXSEPGRVXXITXPXXPPFXXAXXXXXVPHPRXGXXTFRWXXRPXPXPXG---L 870
AP P PG P PP + P P P P P G
Sbjct: 839 APPPPPPPPPPGGKGAPPPPPPPPPPGSKTGPPPPPPPPPPGAKTGSAPPPPPPPGGPRP 898
Query: 871 PXPPKPRXG*TPXPXGPPXXRGP 939
P PP P G P P GP GP
Sbjct: 899 PGPPPPPGGAPPLPPGPRPPGGP 921
>UniRef50_Q15428 Cluster: Splicing factor 3A subunit 2; n=69;
Eukaryota|Rep: Splicing factor 3A subunit 2 - Homo
sapiens (Human)
Length = 464
Score = 34.7 bits (76), Expect = 5.5
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +1
Query: 847 PXPXPXGLPXPPKPRXG*TPXPXGPP 924
P P P GLP PP P G P P GPP
Sbjct: 252 PPPPPGGLPLPPMPPTG--PAPSGPP 275
>UniRef50_UPI000155550B Cluster: PREDICTED: similar to Striated
muscle-specific serine/threonine protein kinase (Aortic
preferentially expressed protein 1) (APEG-1), partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Striated muscle-specific serine/threonine protein kinase
(Aortic preferentially expressed protein 1) (APEG-1),
partial - Ornithorhynchus anatinus
Length = 591
Score = 34.3 bits (75), Expect = 7.3
Identities = 28/95 (29%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 709 GXPSXSEPGRVXX-ITXPXX-PPFXXAXXXXXV----PHPRXGXXTFRWXXRPXPXPXGL 870
G P P R+ +T P PPF + P PR R P P L
Sbjct: 173 GAPPSRPPARLESPLTPPGFSPPFWSSSVPPWREDPDPQPRKAGGPPRPPAPPPPSKAAL 232
Query: 871 PXPPKPRXG*TPXPXGPPXXRGPXXXSSXVXKPXR 975
PP PR G P P P GP +S + R
Sbjct: 233 LPPPSPRMGRRPPPGPVPPAPGPGAPTSPTPRSPR 267
>UniRef50_UPI0000F205BB Cluster: PREDICTED: similar to formin 2; n=2;
Danio rerio|Rep: PREDICTED: similar to formin 2 - Danio
rerio
Length = 1465
Score = 34.3 bits (75), Expect = 7.3
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +1
Query: 847 PXPXPXGLPXPPKPRXG*TPXPXGPPXXRGP 939
P P P P PP P G TP P PP GP
Sbjct: 966 PPPLPGMAPPPPPPFPGMTPPPPPPPPGCGP 996
>UniRef50_A1L2E9 Cluster: Putative uncharacterized protein; n=3;
Danio rerio|Rep: Putative uncharacterized protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 428
Score = 34.3 bits (75), Expect = 7.3
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Frame = +1
Query: 703 PXGXPSXSEPGRVXX---ITXPXXPPFXXAXXXXXVPHPRXGXXTFRWXXRPXPXPXG-L 870
P PS PG V + P PP P P G + P P G L
Sbjct: 275 PPPPPSPPPPGSVYGGSLVPPPPPPPGTNTTMTAPPPPPPPGNMSVPPPPPPPPGNMGVL 334
Query: 871 PXPPKPRXG*TPXPXGPP 924
P PP PR G P PP
Sbjct: 335 PPPPPPRPGNMGVPPPPP 352
>UniRef50_Q3W1M0 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 611
Score = 34.3 bits (75), Expect = 7.3
Identities = 29/93 (31%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Frame = +1
Query: 667 TXXIPXRFPLEAPX--GXPSXSEPGRVXXITXPXXPPFXXAXXXXXVPHPRXGXXTFRWX 840
T P PL AP G S P + P PP A P P G
Sbjct: 375 TVRAPGGAPLVAPVPVGPSSPGGPSSPLGPSSPIGPPVSGAPPLPGAP-PFSGAPPLS-G 432
Query: 841 XRPXPXPXGLPXPPKPRXG*TPXPXGPPXXRGP 939
+P P +P PP P G P P GP GP
Sbjct: 433 AQPAPGASPVPGPP-PATGALPIPGGPAGPGGP 464
>UniRef50_Q41645 Cluster: Extensin; n=1; Volvox carteri|Rep:
Extensin - Volvox carteri
Length = 464
Score = 34.3 bits (75), Expect = 7.3
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 847 PXPXPXGLPXPPKPRXG*TPXPXGPPXXRGPXXXSSXVXKPXR 975
P P P P PP PR +P P PP P S P R
Sbjct: 312 PPPPPRPSPSPPPPRSSPSPPPPSPPPPSPPPPRPSPSPPPPR 354
>UniRef50_Q9VRM2 Cluster: CG10625-PB, isoform B; n=5; Fungi/Metazoa
group|Rep: CG10625-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 682
Score = 34.3 bits (75), Expect = 7.3
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 853 PXPXGLPXPPKPRXG*TPXPXGPPXXRGP 939
P P G P PP P+ P P GPP GP
Sbjct: 556 PGPPGPPGPPGPKGPTKPGPFGPPGPPGP 584
>UniRef50_A0CS42 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 417
Score = 34.3 bits (75), Expect = 7.3
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +1
Query: 757 PXXPPFXXAXXXXXVPHPRXGXXTFRWXXRPXPXPXGLPXPPKPRXG*TPXPXGPPXXRG 936
P PP VP P P P P P PP P G P P GPP
Sbjct: 256 PPPPPSKQQQQQQVVPPPPAPSAKGGAPPPPPPPPPPPPPPPPPPKGVPPPPRGPPPPPP 315
Query: 937 P 939
P
Sbjct: 316 P 316
>UniRef50_Q99954 Cluster: Submaxillary gland androgen-regulated
protein 3 homolog A precursor; n=10; Eutheria|Rep:
Submaxillary gland androgen-regulated protein 3 homolog
A precursor - Homo sapiens (Human)
Length = 134
Score = 34.3 bits (75), Expect = 7.3
Identities = 25/83 (30%), Positives = 28/83 (33%), Gaps = 1/83 (1%)
Frame = +1
Query: 679 PXRFPLEAPXGXPSXSEPGRVXXITXPXXPPFXXAXXXXXVPHPRXGXXTFRWXXRPXPX 858
P RFP P P P PP+ P P G + P P
Sbjct: 40 PPRFPFGTGFVPPPHPPPYGPGRFPPPLSPPYGPGRIPPSPPPP-YGPGRIQSHSLPPPY 98
Query: 859 PXGLPXPP-KPRXG*TPXPXGPP 924
G P PP +PR P P GPP
Sbjct: 99 GPGYPQPPSQPR----PYPPGPP 117
>UniRef50_UPI0000DB7F80 Cluster: PREDICTED: similar to SSXT protein
(Synovial sarcoma, translocated to X chromosome) (SYT
protein); n=1; Apis mellifera|Rep: PREDICTED: similar to
SSXT protein (Synovial sarcoma, translocated to X
chromosome) (SYT protein) - Apis mellifera
Length = 608
Score = 33.9 bits (74), Expect = 9.6
Identities = 25/88 (28%), Positives = 29/88 (32%), Gaps = 7/88 (7%)
Frame = +1
Query: 679 PXRFPLEAPXGXPSXS-EPGRVXXITXPXXPPFXXAXXXXXVPHP-----RXGXXTFRWX 840
P P + P P +PG T PP PHP G +
Sbjct: 502 PPSGPPQGPAPPPGAGPQPGYGPATTQTYVPPTPGGQPQVYTPHPPQAGQHYGHPQYPQS 561
Query: 841 XRPXPXPXGLPX-PPKPRXG*TPXPXGP 921
P P G P PP+P G P P GP
Sbjct: 562 YPPPPAGQGYPQYPPRPPGGHMPPPPGP 589
>UniRef50_Q42421 Cluster: Chitinase; n=1; Beta vulgaris subsp.
vulgaris|Rep: Chitinase - Beta vulgaris subsp. vulgaris
Length = 439
Score = 33.9 bits (74), Expect = 9.6
Identities = 27/81 (33%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Frame = +1
Query: 709 GXPSXSEPGRVXXITXPXXPPFXXAXXXXXVPHPRXGXXTFR----WXXRPXPXPXGLPX 876
G PS P R P P P PR T R P P P P
Sbjct: 46 GRPSRPTPPRPPTPRPPPPRPPTPRPPPPRPPTPRPPPPTPRPPPPRPPTPRPPPPPTPR 105
Query: 877 PPKPRXG*TPXPXGPPXXRGP 939
PP PR TP P PP R P
Sbjct: 106 PPPPRPP-TPRPPPPPTPRPP 125
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 33.9 bits (74), Expect = 9.6
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1
Query: 406 APNTRTASPRXXADSLMQ 353
APNT+TASPR ADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,954,970
Number of Sequences: 1657284
Number of extensions: 6240759
Number of successful extensions: 17120
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14200
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 138488371578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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