Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_N24
         (1160 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      26   0.73 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   1.3  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    24   2.2  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    24   2.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   2.2  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    24   2.2  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    24   2.9  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    24   2.9  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   9.0  

>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 25.8 bits (54), Expect = 0.73
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 845 YEDALEYFLRAETIQPRFTVS 907
           Y++ L YFLR + +QP+++ S
Sbjct: 424 YQNILSYFLRYKKLQPQYSQS 444


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 845 YEDALEYFLRAETIQPRFTVS 907
           Y+  L YFLR + +QP+++ S
Sbjct: 424 YQKILSYFLRYKKLQPQYSQS 444


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 605 FAVHKWYALILDAKSHHNGIKERI 676
           F   K+Y  I+DA  H + IK  I
Sbjct: 7   FETSKYYVTIIDAPGHRDFIKNMI 30


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 605 FAVHKWYALILDAKSHHNGIKERI 676
           F   K+Y  I+DA  H + IK  I
Sbjct: 23  FETSKYYVTIIDAPGHRDFIKNMI 46


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 582 CLEIISYASNMKSFFFALLYLDSF 511
           CL   +Y SNM S F  LL  ++F
Sbjct: 12  CLRWNNYQSNMTSVFHQLLQTEAF 35


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 605 FAVHKWYALILDAKSHHNGIKERI 676
           F   K+Y  I+DA  H + IK  I
Sbjct: 80  FETSKYYVTIIDAPGHRDFIKNMI 103


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 605 FAVHKWYALILDAKSHHNGIKERI 676
           F   K+Y  I+DA  H + IK  I
Sbjct: 80  FETAKYYVTIIDAPGHRDFIKNMI 103


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +2

Query: 509 AKESKYNNAKKKDFIFEAYEIISKHLNNNENNFAVHKWY 625
           +KE K  ++   ++ +  Y   + + NNN NN+    +Y
Sbjct: 309 SKEPKIISSLSNNYKYSNYNNYNNYNNNNYNNYNKKLYY 347


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 309 PVEINIKFFGNCICVISLAT 250
           P E+  K  GNC+ V  + T
Sbjct: 21  PAELTAKLLGNCVRVSPVIT 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,486
Number of Sequences: 438
Number of extensions: 5828
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 39403827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)