Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_N21
         (1239 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.16 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   2.0  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   3.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   6.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.9 bits (64), Expect = 0.16
 Identities = 29/105 (27%), Positives = 36/105 (34%), Gaps = 10/105 (9%)
 Frame = +3

Query: 687 PPNXXGXNPXGIXKXPXXPPGXPP------RXPPX---PXXAVXRKPXX-LXPSGXGGPS 836
           PP+  G +   +   P  PP  PP        PP    P   + R P   L P+    P+
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPA 571

Query: 837 XNPXXXVSXXGXGPPPXPGXXXKPPXXXPNRGPLPGKKMXXXPXP 971
             P    +     PPP P     PP      GPL G      P P
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMG--PPPSPLAGGPLGGPAGSRPPLP 614



 Score = 27.9 bits (59), Expect = 0.65
 Identities = 17/58 (29%), Positives = 18/58 (31%)
 Frame = +3

Query: 711 PXGIXKXPXXPPGXPPRXPPXPXXAVXRKPXXLXPSGXGGPSXNPXXXVSXXGXGPPP 884
           P G    P   P  PP  PP P       P    P G    S  P   +   G   PP
Sbjct: 570 PAGFPNLPNAQP--PPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 27.1 bits (57), Expect = 1.1
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = +2

Query: 725 KXPGXSPRKXPPXPPXSXPGRXPKTXPPXPLXXGGPFPKP 844
           + P   P      PP + P   P   PP PL  GGP   P
Sbjct: 568 RFPAGFPNLPNAQPPPAPPPPPPMGPPPSPL-AGGPLGGP 606



 Score = 26.2 bits (55), Expect = 2.0
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +2

Query: 467 PFPPPXXPXPRPXGGGKGXXPPXGGKXG 550
           P PPP  P P P  GG     P GG  G
Sbjct: 586 PPPPPMGPPPSPLAGG-----PLGGPAG 608



 Score = 25.4 bits (53), Expect = 3.4
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = +2

Query: 461 PXPFPPPXXPXPRPXGGGKGXXPPXGGKXGXPXNRGKP 574
           P   PPP  P P P   G    P  GG  G P     P
Sbjct: 577 PNAQPPPAPPPPPPM--GPPPSPLAGGPLGGPAGSRPP 612



 Score = 24.6 bits (51), Expect = 6.0
 Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
 Frame = +3

Query: 732 PXXPPGXPPRXPPXPXXAVXRKPXXLXPSGXGGPSXNPXXXVSXXGXGPPPXPGXXXKP- 908
           P  P   PP   P P   +   P  L     GGP+ +     +  G G    P     P 
Sbjct: 574 PNLPNAQPP-PAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVPY 632

Query: 909 PXXXPNRGPLP 941
           P   P   P+P
Sbjct: 633 PIIIPLPLPIP 643


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 2.0
 Identities = 19/69 (27%), Positives = 23/69 (33%)
 Frame = +2

Query: 656 PPPXXXXXKXXPQXXGGKPXXDXKXPGXSPRKXPPXPPXSXPGRXPKTXPPXPLXXGGPF 835
           PP      +  P   GG      + PG      P  PP + PG  P   P  P   G   
Sbjct: 200 PPRTGTPTQPQPPRPGGMYP---QPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQG--M 254

Query: 836 PKPXPXGXP 862
            +P   G P
Sbjct: 255 QRPPMMGQP 263



 Score = 25.8 bits (54), Expect = 2.6
 Identities = 13/44 (29%), Positives = 14/44 (31%)
 Frame = +2

Query: 731 PGXSPRKXPPXPPXSXPGRXPKTXPPXPLXXGGPFPKPXPXGXP 862
           PG  P   P  P      R P    P P+    P   P P   P
Sbjct: 238 PGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISP 281


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = +3

Query: 876 PPPXPGXXXKPPXXXPNRGPLPGKKMXXXPXP 971
           P   PG    PP      GPLP   M   P P
Sbjct: 89  PGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 827 PXSXGXKXGXFSXNGXXGXXGGPGGXSGG 741
           P + G   G  +  G  G  GGPG   GG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
 Frame = -2

Query: 848 GGVXGR----APXSXGXKXGXFSXNGXXGXXGGPGGXSGGXXRXFXN 720
           GGV G     A  + G   G  S  G  G  GG GG  G   R   N
Sbjct: 707 GGVAGMMSTGAGVNRGGDGGCGSIGGEVGSVGGGGGGGGSSVRDGNN 753


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.149    0.511 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,657
Number of Sequences: 2352
Number of extensions: 11906
Number of successful extensions: 42
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 141426462
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)