Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_N18
(1199 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0668 - 4882174-4884204 470 e-133
07_01_0075 - 558829-560859 466 e-131
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 133 2e-31
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 52 7e-07
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 52 1e-06
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 52 1e-06
05_07_0147 - 28022018-28022104,28022207-28022287,28022513-280226... 49 6e-06
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 44 2e-04
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 42 0.001
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 39 0.009
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 36 0.048
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 36 0.048
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 36 0.048
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 35 0.11
12_01_0610 + 5030130-5030247,5030957-5033193 34 0.26
02_04_0230 + 21103524-21103746,21105393-21105661,21105845-211060... 34 0.26
08_01_0664 + 5741111-5741113,5741491-5741658,5741741-5741864,574... 33 0.59
08_01_0709 + 6265949-6266452,6267697-6267786,6268257-6268402,626... 32 1.0
08_02_0627 + 19449196-19449651,19449723-19449861,19450260-194503... 31 1.8
05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 31 1.8
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068... 30 3.1
10_08_1002 + 22160109-22160264,22160374-22160484,22160612-221606... 30 3.1
03_03_0153 - 14910420-14910769,14910946-14911008,14911084-149113... 30 3.1
06_03_0160 + 17366392-17367525,17367856-17368206 30 4.2
01_03_0056 + 12089404-12090300,12090429-12090581,12090999-120911... 30 4.2
12_02_0272 - 16634765-16635004,16635412-16635457,16636107-166380... 29 5.5
05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141... 29 5.5
03_05_0739 + 27271404-27271988,27272265-27272411 29 7.3
08_02_1310 - 26037025-26038074 29 9.6
07_03_0615 + 19983003-19983238,19983297-19983558,19983651-199839... 29 9.6
>06_01_0668 - 4882174-4884204
Length = 676
Score = 470 bits (1159), Expect = e-133
Identities = 223/348 (64%), Positives = 276/348 (79%)
Frame = +2
Query: 113 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 292
M YNFK+I VVP KDFIDIILS+TQR+TPTVVHK Y ISRIR FY+RKVKYTQ NF++
Sbjct: 1 MVQYNFKRITVVPPGKDFIDIILSRTQRQTPTVVHKGYSISRIRQFYMRKVKYTQSNFYE 60
Query: 293 RLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYG 472
+LS +I +FP+LDD+HPFY DL++VLY+KDHYKL LGQ+NTAR++I +AKDY+RLLKYG
Sbjct: 61 KLSTVIDDFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYG 120
Query: 473 DSLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVG 652
DSLYRCK LK AALGRM T++KR +L YLEQ+RQH+ARLPSIDP TRT++ICG+PNVG
Sbjct: 121 DSLYRCKCLKVAALGRMCTVIKRISPSLAYLEQIRQHMARLPSIDPNTRTLLICGYPNVG 180
Query: 653 KSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHPLEERNVIEMQA 832
KSSF+NKITRADV+VQPYAFTTKSL+VGH DYKYLR+QVIDTPGILD P E+RN+IEM +
Sbjct: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHADYKYLRYQVIDTPGILDRPFEDRNIIEMCS 240
Query: 833 VTALAHLRAAILYFIDPSEQCGHSIEDQISLFESIKPLFTSKPLIVVLNKMDVVKPEXLS 1012
+TALAHLRAA+L+F+D S CG+SI Q +LF SIK LF +KPL++V NK D+ E LS
Sbjct: 241 ITALAHLRAAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLVIVCNKTDLQPLENLS 300
Query: 1013 XSKKQXLDDLTETCSXGNLXQRGFXSDLXRXPXMXMSXXTEXGVXXXK 1156
+ + ++ + + L G ++ + MS TE GV K
Sbjct: 301 EEDMKLVMEM-KAEAMKTLGHGGEANE--EGVLLTMSTLTEEGVMAVK 345
>07_01_0075 - 558829-560859
Length = 676
Score = 466 bits (1150), Expect = e-131
Identities = 213/300 (71%), Positives = 257/300 (85%)
Frame = +2
Query: 113 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 292
M YNFK+I VVP KDFIDIILS+TQR+TPTVVHK Y ISRIR FY+RKVKYTQ NF++
Sbjct: 1 MVQYNFKRITVVPPGKDFIDIILSRTQRQTPTVVHKGYAISRIRQFYMRKVKYTQSNFYE 60
Query: 293 RLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYG 472
+LS +I +FP+LD +HPFY DL++VLY+KDHYKL LGQ+NTAR++I +AKDY+RLLKYG
Sbjct: 61 KLSTVIDDFPRLDGIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYG 120
Query: 473 DSLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVG 652
DSLYRCK LK AALGRM T++KR +L YLEQ+RQH+ARLPSIDP TRT++ICG+PNVG
Sbjct: 121 DSLYRCKCLKVAALGRMCTVIKRISPSLAYLEQIRQHMARLPSIDPNTRTLLICGYPNVG 180
Query: 653 KSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHPLEERNVIEMQA 832
KSSF+NKITRADV+VQPYAFTTKSL+VGH DYKYLR+QVIDTPGILD P E+RN+IEM +
Sbjct: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHADYKYLRYQVIDTPGILDRPFEDRNIIEMCS 240
Query: 833 VTALAHLRAAILYFIDPSEQCGHSIEDQISLFESIKPLFTSKPLIVVLNKMDVVKPEXLS 1012
+TALAHLRAA+L+F+D S CG+SI Q +LF SIK LF +KPL++V NK D+ E LS
Sbjct: 241 ITALAHLRAAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLVIVCNKTDLQPLENLS 300
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 133 bits (322), Expect = 2e-31
Identities = 84/292 (28%), Positives = 149/292 (51%), Gaps = 3/292 (1%)
Frame = +2
Query: 128 FKKIAVVPTAKDFIDIILSKTQRKTPTV-VHKHYKISRIRGFYIRKVKYTQQNFHDRLSR 304
F++I +V A D + K++ PT + K R +G +++ + L
Sbjct: 83 FQRIPMVMPATDILMSAQRKSRNVPPTKGIANIAKRERNKG--AKQLDALMKEISVPLRT 140
Query: 305 IIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLY 484
+ FPK D+HP+ L+ + + + +Y+ + +++ R I++V K + + SL
Sbjct: 141 YTENFPKRRDLHPYERSLIELTFGEGYYEKVIARVDALRKKINSVGKQHASVC--AKSLT 198
Query: 485 RCKQLKRAALGR--MATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGKS 658
+ + +R + GR + + + L + + L +P +DP+ T+ + G PNVGKS
Sbjct: 199 KREAEERLSEGRKKLEEAFEHGKWVIDDLVNIAKTLRSMPVVDPHIPTLCLVGSPNVGKS 258
Query: 659 SFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAVT 838
S + ++ EV Y FTT+ + +GH + R+QV DTPG+L +ERN IE +
Sbjct: 259 SLVRILSSGKPEVCSYPFTTRGILMGHIVSNHERFQVTDTPGLLTRDDDERNNIEKLTLA 318
Query: 839 ALAHLRAAILYFIDPSEQCGHSIEDQISLFESIKPLFTSKPLIVVLNKMDVV 994
L+HL A+LY D SE CG S+ DQ ++ IK F + + V++K D++
Sbjct: 319 VLSHLPIAVLYVHDLSEDCGTSVADQYITYKHIKERFGDRLWLDVISKSDLL 370
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 52.4 bits (120), Expect = 7e-07
Identities = 29/93 (31%), Positives = 47/93 (50%)
Frame = +2
Query: 623 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHPL 802
+ + GFP+VGKS+ + +T E Y FTT + G Y + Q++D PGI++
Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLLDLPGIIEGAS 124
Query: 803 EERNVIEMQAVTALAHLRAAILYFIDPSEQCGH 901
E + + V A+A +L +D S+ GH
Sbjct: 125 EGKG--RGRQVIAVAKSSDLVLMVLDASKSEGH 155
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 51.6 bits (118), Expect = 1e-06
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Frame = +2
Query: 629 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYK-YLRWQVIDTPGILDHPLE 805
+ G PN GKS+ ++ ++RA E+ YAFTT +G Y+ Y +V D PG++ E
Sbjct: 344 LVGMPNAGKSTLLSALSRARPEIADYAFTTLRPNIGSLTYEDYFSVKVADIPGLIKGAHE 403
Query: 806 ERNV-------IEMQAVTALAHLRAAIL---YFIDPSEQCGHSIEDQISLFESIKPLFTS 955
R + IE V A AA L + P EQ + D + E + T
Sbjct: 404 NRGLGHAFLRHIERTKVLAYVLDLAATLNGRKGVPPWEQ----LRDLVVELEHYQEGLTK 459
Query: 956 KPLIVVLNKMD 988
+P ++V NK+D
Sbjct: 460 RPSLIVANKID 470
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 51.6 bits (118), Expect = 1e-06
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 629 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILD 793
+ GFP+VGKS+ +NK+T EV Y FTT + G YK + Q++D PGI++
Sbjct: 80 LVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIMYKGAKIQLLDLPGIIE 134
>05_07_0147 - 28022018-28022104,28022207-28022287,28022513-28022614,
28022701-28022799,28023060-28023185,28023272-28023385,
28023478-28023618,28023717-28023862,28024011-28024386
Length = 423
Score = 49.2 bits (112), Expect = 6e-06
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = +2
Query: 623 IIICGFPNVGKSSFINKITRADVE-VQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP 799
+ + G PNVGKS+ IN+I + V TT+ +G + + DTPG++
Sbjct: 128 VAVLGKPNVGKSTLINQIVGQKLSIVTDKPQTTRHRILGICSEPEYQIILYDTPGVIKKE 187
Query: 800 LEERNVIEMQAVTALAHLRAAILYFIDPSEQCGHSIEDQISLFESIKPLFTSKPLIVVLN 979
+ + + + M+ V + +L +D + I D+I L E + T P+++VLN
Sbjct: 188 MHKLDTMMMKNVRSAVGSADCVLVVVDACKM-PEKI-DEI-LEEGVGNKDTELPVLLVLN 244
Query: 980 KMDVVKP 1000
K D++KP
Sbjct: 245 KKDLIKP 251
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 44.0 bits (99), Expect = 2e-04
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = +2
Query: 629 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVI-DTPGILDHPLE 805
I G PN GKS+ + I+ A + Y FTT +G + V+ D PG+L+
Sbjct: 457 IVGAPNAGKSTLLTAISAAKPTIANYPFTTLLPNLGVVSLDFDATMVVADLPGLLEG--A 514
Query: 806 ERNVIEMQAVTALAHLRAAILYFIDPS-EQCGHSIEDQISLFESIKPLFTSKPLIVVLNK 982
R + + +++ +D S EQ + E E P KP IVV NK
Sbjct: 515 HRGYGLGHEFLRHSERCSVLVHVVDGSGEQPEYEFEAVRLELELFSPSLVDKPYIVVYNK 574
Query: 983 MDV 991
MD+
Sbjct: 575 MDL 577
>03_06_0323 + 33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 41.9 bits (94), Expect = 0.001
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Frame = +2
Query: 629 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHT--DYKYLRWQVIDTPGILDHP- 799
+ G PN GKS+ ++ IT A ++ Y FTT +G D Q + D P
Sbjct: 281 LVGLPNAGKSTLLSAITLARPDIADYPFTTLMPNLGRLGGDPALGALQFSSEATLADLPG 340
Query: 800 -LEERNVIEMQAVTALAHLR--AAILYFIDPSEQCGHSIEDQISLFESIK---PLFTSKP 961
+E ++ + L HLR I++ +D + ++D + E ++ P + +P
Sbjct: 341 LIEGAHLGKGLGRNFLRHLRRTRVIVHVVDAA--ADDPVDDYKIVREELRMYNPQYLERP 398
Query: 962 LIVVLNKMDVVKPEXLSXSKKQXLDDL-TETCSXGN 1066
+VVLNK+D+ K + S + + E C N
Sbjct: 399 YVVVLNKIDLPKAQDRLSSLAFEISSIGCEECDGNN 434
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 38.7 bits (86), Expect = 0.009
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Frame = +2
Query: 623 IIICGFPNVGKSSFINKITRAD-VEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHP 799
+ I G PNVGKS+ +N + + V V P A T+ + ++DT G ++
Sbjct: 314 LAIVGRPNVGKSTLLNTLLQEQRVLVGPEAGLTRDSIRTQFQFDNRTVYLVDTAGWMERS 373
Query: 800 LEERNVIEMQAVTALAHL-RAAILYFIDPSEQCGHSIE--DQISLFESIKPLFTSKPLIV 970
+E+ + V + +L RA I+ + E+ S + + + + + + L+V
Sbjct: 374 GKEKGPASLSVVQSRKNLMRAHIVALVLDGEKIAKSKSSMNHPEVLIARQAIEEGRGLVV 433
Query: 971 VLNKMDVVK 997
++NKMD+++
Sbjct: 434 IVNKMDLLR 442
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 36.3 bits (80), Expect = 0.048
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 623 IIICGFPNVGKSSFINKI---TRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILD 793
+ I G PNVGKS+ N++ RA V +P T LY G + + + VIDT G++
Sbjct: 163 VAIIGRPNVGKSALFNRLVGGNRAIVVDEP-GVTRDRLY-GRSYWGDREFMVIDTGGVIT 220
Query: 794 HPLEERNVIEMQAVT 838
+ V+E A+T
Sbjct: 221 LSKSQAGVMEELAIT 235
Score = 35.9 bits (79), Expect = 0.063
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 611 YTRTIIICGFPNVGKSSFINKITRAD-VEVQPYAFTTK-SLYVGHTDYKYLRWQVIDTPG 784
Y I I G PNVGKSS +N + D V P + TT+ ++ T ++++IDT G
Sbjct: 372 YIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTEDGQKYKLIDTAG 431
Query: 785 I 787
I
Sbjct: 432 I 432
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 36.3 bits (80), Expect = 0.048
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Frame = +2
Query: 563 LEQVRQH--LARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 736
LE VR+H L R + + G+ N GKS+ +N++T ADV + F T
Sbjct: 234 LESVRKHRKLYRNRRQSVPIPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTR 293
Query: 737 HTDYKY-LRWQVIDTPGILDHPLEERNVIEMQAVTALAHLRAAILYFIDPSEQCGHSIED 913
K + + DT G + L V +A + I++ +D S D
Sbjct: 294 RVLMKNGTEFLLTDTVGFI-QKLPTMLVAAFRATLEEISESSVIVHLVDISHPLAQQQID 352
Query: 914 QISLFESIKPL-FTSKPLIVVLNKMD 988
+ + +K L S P +VV NK+D
Sbjct: 353 AVD--KVLKELDIESIPKLVVWNKID 376
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 36.3 bits (80), Expect = 0.048
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +2
Query: 563 LEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADV-EVQPYAFTTKS-LYVG 736
L V + ARL S D ++ G+PNVGKSS IN + V +V P TK Y+
Sbjct: 300 LLSVLRQFARLKS-DKQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPIPGETKVWQYIT 358
Query: 737 HTDYKYLRWQVIDTPGILDHPLEERNVIEMQAVTALAHLRAA 862
T +L ID PG++ + I ++ V + +L A
Sbjct: 359 LTKRIFL----IDCPGVVYQNNDSETDIVLKGVVRVTNLADA 396
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 35.1 bits (77), Expect = 0.11
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 620 TIIICGFPNVGKSSFINKITRAD-VEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGIL 790
T+ I G PNVGKSS IN + R+ V V T+S+ D K +++D PG++
Sbjct: 270 TVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGVTRSMQEVQLDKKV---KLLDCPGVV 324
>12_01_0610 + 5030130-5030247,5030957-5033193
Length = 784
Score = 33.9 bits (74), Expect = 0.26
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 596 PSIDPYTRTIIICGFPNVGKSSFINKI-TRADVEVQPYAFTTKSLYVGHTDYKYLRWQVI 772
P +D R I++ G VGKS+ IN I V A T+ + K +R VI
Sbjct: 154 PDLDLPLR-ILLLGKTGVGKSATINSIFDEPKVATNALAPATERIRRIDGTIKGIRVTVI 212
Query: 773 DTPGILDHPLEER 811
DTPG+L H +R
Sbjct: 213 DTPGLLPHYHRQR 225
>02_04_0230 + 21103524-21103746,21105393-21105661,21105845-21106009,
21106081-21106203,21107261-21107473
Length = 330
Score = 33.9 bits (74), Expect = 0.26
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 9/163 (5%)
Frame = +2
Query: 593 LPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPY--AFTTKSLYVGHTDYKYLR-W 763
LPS D T+++CG GKS+ N I + V Y A T + + T K R
Sbjct: 12 LPSADI---TVVLCGKLGCGKSATGNSIVGREAFVSEYSHASVTSTCQLASTALKDGRTL 68
Query: 764 QVIDTPGILDHPLEERNVIEMQAVTALAHLRAAILYFIDPSEQCGHSIEDQISLFESIKP 943
VIDTPG+ + + + + V ++ + I + + S E+IK
Sbjct: 69 NVIDTPGLFEMTITSEDA-GKEIVKCMSMAKDGIHAVLMVFSATSRFTREDSSTIETIKE 127
Query: 944 LFTSK---PLIVVLNKMDVV---KPEXLSXSKKQXLDDLTETC 1054
F K +I+V D+V K + + + + L E C
Sbjct: 128 FFGEKIVDHMILVFTYGDLVGENKLKSMLNNAPEYLQKTVELC 170
>08_01_0664 +
5741111-5741113,5741491-5741658,5741741-5741864,
5742078-5742169,5742254-5742352,5742476-5742589,
5743190-5743254,5743342-5743467,5743870-5743945,
5744502-5744594,5744944-5744994,5745084-5745182
Length = 369
Score = 32.7 bits (71), Expect = 0.59
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 635 GFPNVGKSSFINKITRADVEVQPYAFTT 718
G PNVGKS+F N +T+ + + + F T
Sbjct: 3 GLPNVGKSTFFNIVTKLSIPAENFPFCT 30
>08_01_0709 + 6265949-6266452,6267697-6267786,6268257-6268402,
6268534-6268710,6268774-6268840,6268949-6269056,
6269718-6269732
Length = 368
Score = 31.9 bits (69), Expect = 1.0
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Frame = +2
Query: 605 DPYTRTIIICGFPNVGKSSFINKITRADV-EVQPYAFTTKSLYVGHTDYKYLRWQVIDTP 781
D + ++ I G PN GKSS N + V V TT +G + DTP
Sbjct: 145 DQMSLSVGIVGAPNAGKSSLTNTMVGTKVAAVSRKTNTTTHEILGVLTKGITQICFFDTP 204
Query: 782 GIL--DHPLEERNV-IEMQAVTALAHLRAAILYFIDPSEQCGHSIEDQISLFESI-KPLF 949
G++ H L R+V + +++ + +L ++ D + + L + + +
Sbjct: 205 GLMLGHHGLPHRDVTVRVESAWSSINLYDLLIVLFDVNRHLKTPDTRVVKLIKRLGAEVN 264
Query: 950 TSKPLIVVLNKMDVV--KPEXLSXSKK 1024
++ I+ +NK+D+V K + L +K+
Sbjct: 265 PNQKRILCMNKVDLVEDKKDLLKVAKE 291
>08_02_0627 +
19449196-19449651,19449723-19449861,19450260-19450381,
19450685-19450888,19450981-19451040,19451628-19451820,
19451880-19451998,19452189-19452413,19452534-19452728
Length = 570
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 623 IIICGFPNVGKSSFINKITRAD-VEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGI 787
+ I G PNVGKSS +N ++++ V A TT+ + + + ++DT GI
Sbjct: 308 VAIIGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEANVSIHGIPITLLDTAGI 363
>05_04_0401 -
20982923-20983106,20983129-20983186,20983322-20983503,
20983637-20983752,20984148-20984234,20984334-20984477,
20984556-20984672,20984790-20984936,20985717-20985938,
20986919-20987072,20987583-20987632,20987870-20987921,
20987985-20988211
Length = 579
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +2
Query: 629 ICGFPNVGKSSFINK-ITRADVEVQPYAFTTKSLYVGHTDYKYLRW----QVIDTPGIL 790
I G+PNVGKSS IN+ + R P T+ L K++R+ +++D+PGIL
Sbjct: 405 IVGYPNVGKSSLINRLLKRRMCPAAPRPGVTREL-------KWVRFGSDLELLDSPGIL 456
>11_04_0165 +
14305885-14306007,14306538-14306642,14306792-14306869,
14307710-14307757,14308173-14308314,14308394-14308464,
14309210-14309306,14309517-14309728,14311995-14312267
Length = 382
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 614 TRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 736
T +++ G PNVGKS+ IN I R P K VG
Sbjct: 136 TLLVMVVGVPNVGKSALINSIHRIVTSRFPVQDKNKRATVG 176
>10_08_1002 +
22160109-22160264,22160374-22160484,22160612-22160689,
22160774-22160921,22161007-22161077,22161430-22161526,
22161603-22161790,22161960-22162223
Length = 370
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 614 TRTIIICGFPNVGKSSFINKITR 682
T T+++ G PNVGKS+ +N + R
Sbjct: 135 TGTVLLVGIPNVGKSAIVNAMHR 157
>03_03_0153 -
14910420-14910769,14910946-14911008,14911084-14911339,
14911432-14911522,14911798-14912096,14912177-14912295,
14922536-14922594,14922676-14922965,14923052-14923567,
14923634-14923936
Length = 781
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 665 INKITRADVEVQPYAFTTKSLYVGHTDYKYLR 760
++++T A +E QP+ +T+ LY H D + R
Sbjct: 527 VHRVTFAPLEQQPHVASTRDLYARHRDQDFAR 558
>06_03_0160 + 17366392-17367525,17367856-17368206
Length = 494
Score = 29.9 bits (64), Expect = 4.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 969 TIRGLLVNKGFILSNSDIWSSMLW 898
TIR L NK ++L D+WS+ +W
Sbjct: 271 TIRSYLENKRYVLVLDDVWSTNVW 294
>01_03_0056 +
12089404-12090300,12090429-12090581,12090999-12091157,
12091575-12091734,12092185-12092201,12092682-12092798,
12092914-12093303
Length = 630
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 218 KHYK--ISRIRGFYIRKVKYTQQNFHDRLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYK 391
K YK +S G+Y+ KV + +S + FP +D P ++ N L+D+ K
Sbjct: 423 KRYKELLSDSEGYYVPKVIDELSSKKVLMSEFVPGFP-IDKTDPNWS---NFLFDEPTRK 478
Query: 392 LGLGQLNTARHLIDNVAKDYVRLL 463
L AR DY+R++
Sbjct: 479 FNLIDFGAARDFPKRFVDDYLRMV 502
>12_02_0272 -
16634765-16635004,16635412-16635457,16636107-16638098,
16639478-16640286
Length = 1028
Score = 29.5 bits (63), Expect = 5.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 969 TIRGLLVNKGFILSNSDIWSSMLW 898
T+RG L NK +++ DIW++ W
Sbjct: 261 TLRGHLANKRYLIVVDDIWNTQAW 284
>05_04_0284 -
19813179-19813340,19813464-19813748,19813850-19814131,
19814224-19814531,19814654-19814927,19815807-19816175,
19816372-19816434,19817495-19817789,19817818-19818008,
19818123-19818428,19818516-19818638
Length = 885
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 866 LYFIDPSEQCGHSIEDQISLFESIKPLFTSKPLIV 970
LY+I P + GH+I+D I++ +K T+ P+++
Sbjct: 487 LYYIGPVD--GHNIDDLITILREVKSTKTTGPVLI 519
>03_05_0739 + 27271404-27271988,27272265-27272411
Length = 243
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 734 GHTDYKYLRWQV-IDTPGILDHPLEERNVIEMQAVTALAHLRAAILYF 874
G+ ++ L WQ +D G LD+ I +Q ++ HLR A L+F
Sbjct: 108 GNGEFLILHWQADVDGNGYLDYGEFVAVTIHLQRLSNDNHLRTAFLFF 155
>08_02_1310 - 26037025-26038074
Length = 349
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 362 NVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQLKRAALGRMA 526
++L + Y+LG +L + + L+DNV + V + Y C +LK+ L +A
Sbjct: 260 HLLAAAERYELGGLKLLSTKKLLDNVTPENVAGIIVCAETYGCPELKKKCLDYLA 314
>07_03_0615 +
19983003-19983238,19983297-19983558,19983651-19983906,
19983982-19984044,19984131-19984570
Length = 418
Score = 28.7 bits (61), Expect = 9.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 671 KITRADVEVQPYAFTTKSLYVGHTDYKYLR 760
++T A +E QP+ +T+ LY H D + R
Sbjct: 136 RVTFAPLEQQPHVASTRDLYARHRDQDFAR 165
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,543,499
Number of Sequences: 37544
Number of extensions: 614530
Number of successful extensions: 1449
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3666490380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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