Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_N17
         (1183 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D50916-1|BAA09475.2| 1075|Homo sapiens KIAA0126 protein.               33   2.7  
BC112367-1|AAI12368.1| 1066|Homo sapiens UBE4A protein protein.        33   2.7  
BC111417-1|AAI11418.1| 1066|Homo sapiens UBE4A protein protein.        33   2.7  

>D50916-1|BAA09475.2| 1075|Homo sapiens KIAA0126 protein.
          Length = 1075

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 23   NPLXFYQLRPATELKEXIQQWQRE 94
            +PL   Q+RP TELKE IQ+W  E
Sbjct: 1043 SPLTMDQIRPNTELKEKIQRWLAE 1066


>BC112367-1|AAI12368.1| 1066|Homo sapiens UBE4A protein protein.
          Length = 1066

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 23   NPLXFYQLRPATELKEXIQQWQRE 94
            +PL   Q+RP TELKE IQ+W  E
Sbjct: 1034 SPLTMDQIRPNTELKEKIQRWLAE 1057


>BC111417-1|AAI11418.1| 1066|Homo sapiens UBE4A protein protein.
          Length = 1066

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 23   NPLXFYQLRPATELKEXIQQWQRE 94
            +PL   Q+RP TELKE IQ+W  E
Sbjct: 1034 SPLTMDQIRPNTELKEKIQRWLAE 1057


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,628,959
Number of Sequences: 237096
Number of extensions: 2438026
Number of successful extensions: 3577
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3577
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16568915230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)