Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_N16
(1237 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 31 1.4
12_02_0299 - 17051570-17052474,17053542-17053755 31 1.9
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 31 1.9
07_01_0080 + 587674-588510 30 3.3
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 30 3.3
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 28 3.7
03_06_0599 + 34984869-34985319,34986581-34987563 30 4.3
02_05_0686 - 30900748-30902167,30903442-30904742 30 4.3
07_01_0753 - 5799733-5799741,5799938-5800642 29 5.7
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 5.7
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 5.7
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 29 5.7
01_01_0046 - 331758-332627 29 5.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 7.5
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 29 7.5
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 29 10.0
05_01_0545 - 4756266-4757510 29 10.0
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 10.0
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = -1
Query: 646 PXPPXFFF---FXGPXXPPPXXKPPPPP 572
P PP F GP PPP PPPPP
Sbjct: 13 PSPPPFSSRPRVVGPPPPPPSDPPPPPP 40
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -1
Query: 676 FFXPXXFWXFPXPPXFFF-FXGPXXPPPXXKPPPPP 572
F P W + PP F F P PP PPPPP
Sbjct: 260 FPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPP 295
Score = 30.7 bits (66), Expect = 2.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 640 PPXFFFFXGPXXPPPXXKPPPP 575
PP F+ P PPP PPPP
Sbjct: 311 PPLPSFYPSPPPPPPPPPPPPP 332
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 649 FPXPPXFFFFXGPXXPPPXXKPPPPP 572
FP P F+ P PPP PPPPP
Sbjct: 310 FPPLPSFY----PSPPPPPPPPPPPP 331
Score = 28.7 bits (61), Expect = 10.0
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -1
Query: 694 FXXKKXFFXPXXFWXFPXPPXFFFFXGPXXPPPXXKPPPPP 572
F + +F P F P PP F P P P PP PP
Sbjct: 219 FCTPRPWFPPIPFLTPPPPP---FLPFPLPPIPFLTPPSPP 256
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 640 PPXFFFFXGPXXPPPXXKPPPPP 572
PP F GP PP PPPPP
Sbjct: 516 PPGFQGLAGPFYGPPYPAPPPPP 538
>07_01_0080 + 587674-588510
Length = 278
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPPXXKPPPPP 572
P PP P PPP PPPPP
Sbjct: 95 PPPPPSSGSPPPPPPPPPPPPPPPP 119
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPPXXKPPPPP 572
P PP P PPP PPPPP
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPPPPP 117
Score = 29.5 bits (63), Expect = 5.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPPXXKPPPPP 572
P PP P PPP PPPPP
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPPPPP 118
Score = 29.5 bits (63), Expect = 5.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPPXXKPPPPP 572
P PP P PPP PPPPP
Sbjct: 96 PPPPSSGSPPPPPPPPPPPPPPPPP 120
>02_04_0567 -
23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 631 FFFFXGPXXPPPXXKPPPPP 572
F F P PPP PPPPP
Sbjct: 33 FTFLCPPPPPPPPPPPPPPP 52
Score = 29.5 bits (63), Expect = 5.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 637 PXFFFFXGPXXPPPXXKPPPPP 572
P F P PPP PPPPP
Sbjct: 32 PFTFLCPPPPPPPPPPPPPPPP 53
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 27.9 bits (59), Expect(2) = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPPXXKPPPP 575
P PP F P PPP KPP P
Sbjct: 357 PPPPPPFAPTLPPPPPPRRKPPSP 380
Score = 20.6 bits (41), Expect(2) = 3.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1
Query: 598 PXXKPPPPP 572
P +PPPPP
Sbjct: 408 PFVQPPPPP 416
>03_06_0599 + 34984869-34985319,34986581-34987563
Length = 477
Score = 29.9 bits (64), Expect = 4.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 616 GPXXPPPXXKPPPPP 572
GP PPP PPPPP
Sbjct: 395 GPAPPPPPQPPPPPP 409
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPPXXKPPPPP 572
P PP P PPP PPPPP
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPP 340
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPPXXKPPPPP 572
P PP GP PPP PPPPP
Sbjct: 337 PPPPP----KGPPPPPPAKGPPPPP 357
>07_01_0753 - 5799733-5799741,5799938-5800642
Length = 237
Score = 29.5 bits (63), Expect = 5.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPPXXKPPPPP 572
P P + F PPP PPPPP
Sbjct: 29 PNQPYYAFPAAAYAPPPPPPPPPPP 53
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 655 WXFPXPPXFFFFXGPXXPPPXXKPPPPP 572
W P PP P PPP PPPPP
Sbjct: 35 WSAPPPPARHRAPSPPRPPP---PPPPP 59
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.5 bits (63), Expect = 5.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 616 GPXXPPPXXKPPPPP 572
GP PPP PPPPP
Sbjct: 263 GPPRPPPPQVPPPPP 277
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 29.5 bits (63), Expect = 5.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPPXXKPPPPP 572
P PP + G PPP PPPPP
Sbjct: 114 PPPPHLLHYYGHPPPPP---PPPPP 135
>01_01_0046 - 331758-332627
Length = 289
Score = 29.5 bits (63), Expect = 5.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 640 PPXFFFFXGPXXPPPXXKPPPPP 572
PP ++F PPP PPPPP
Sbjct: 9 PPQRYWFPYWTSPPPPPPPPPPP 31
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 7.5
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPP----XXKPPPPP 572
P PP ++ P PPP +PPPPP
Sbjct: 82 PPPPPQMYYQPPPPPPPYGVNSSQPPPPP 110
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPPXXKPPPPP 572
P PP + P P P PPPPP
Sbjct: 50 PPPPQAMYQAHPQYPMPGSLPPPPP 74
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 646 PXPPXFFFFXGPXXPPPXXKPPPPP 572
P PP G PPP PPPPP
Sbjct: 1932 PPPPPPPPVEGKPKPPPHAPPPPPP 1956
>05_01_0545 - 4756266-4757510
Length = 414
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 673 FXPXXFWXFPXPPXFFFFXGPXXPPPXXKPPPPP 572
F P P PP + P P P PPPPP
Sbjct: 378 FVPSPLLPPPPPPAYPGPLPPVYPVPYASPPPPP 411
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.7 bits (61), Expect = 10.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 613 PXXPPPXXKPPPPP 572
P PPP +PPPPP
Sbjct: 364 PPPPPPPPRPPPPP 377
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,504,416
Number of Sequences: 37544
Number of extensions: 178026
Number of successful extensions: 3443
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2251
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3806166204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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