Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_N16
         (1237 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical ...    31   1.3  
AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical ...    31   1.3  
U50310-5|AAA92541.1|  318|Caenorhabditis elegans Ground-like (gr...    29   6.8  

>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
           protein K02E2.2 protein.
          Length = 1021

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = -1

Query: 640 PPXFFFFXGPXXPPPXXKPPPPP 572
           PP FF    P  PPP   PPPPP
Sbjct: 777 PPPFFAL--PVPPPPPVPPPPPP 797


>AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical
           protein R148.5b protein.
          Length = 505

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = -1

Query: 676 FFXPXXFWXFPXPPXFFFFXGPXXPPPXXKPPP 578
           FF P     FP PP  F   G   PPP   PPP
Sbjct: 295 FFPPPPRGHFPPPPPHFM--GRGMPPPFMPPPP 325


>AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical
           protein R148.5a protein.
          Length = 528

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = -1

Query: 676 FFXPXXFWXFPXPPXFFFFXGPXXPPPXXKPPP 578
           FF P     FP PP  F   G   PPP   PPP
Sbjct: 295 FFPPPPRGHFPPPPPHFM--GRGMPPPFMPPPP 325


>U50310-5|AAA92541.1|  318|Caenorhabditis elegans Ground-like (grd
           related) protein 9 protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
 Frame = -1

Query: 646 PXPPXFFFFXGPXX---PPPXXKPPPPP 572
           P PP  +   GP     PPP   PPPPP
Sbjct: 117 PPPPVQYQNQGPQYIEAPPPPPSPPPPP 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,670,115
Number of Sequences: 27780
Number of extensions: 112090
Number of successful extensions: 1201
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3422502224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)