Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_N15
         (1220 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   0.061
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    31   0.090
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   7.8  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect(2) = 0.061
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 453 GXPPPPPPXKP 485
           G PPPPPP  P
Sbjct: 781 GSPPPPPPPPP 791



 Score = 24.6 bits (51), Expect(2) = 0.061
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 459 PPPPPPXKPXXPG 497
           PPPPPP     PG
Sbjct: 785 PPPPPPPSSLSPG 797


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 30.7 bits (66), Expect = 0.090
 Identities = 18/54 (33%), Positives = 19/54 (35%)
 Frame = +2

Query: 728 PGFPPKXPPXXPPXXXPGXKKKXXPFXPXXXGGXSXXPXGGXXPXGXGPPPXGG 889
           PG P    P  PP   PG +    P  P    G    P  G  P    P P GG
Sbjct: 222 PGVPMPMRPQMPPGAVPGMQPGMQP-RPPSAQGMQRPPMMGQPPPIRPPNPMGG 274


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +2

Query: 458 PPPXPPXKTPXPXXXGGGXGXP 523
           PPP PP   P     GG  G P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGP 606



 Score = 24.2 bits (50), Expect = 7.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 441 GXXXGXPPPPPP 476
           G   G PPPPPP
Sbjct: 525 GGPLGPPPPPPP 536


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 7.8
 Identities = 16/58 (27%), Positives = 19/58 (32%)
 Frame = +2

Query: 464 PXPPXKTPXPXXXGGGXGXPPPXGGKRXXPKXGGXPXKKXXXKXXQKGPKXKXGXXGG 637
           P  P         GGG G P   G K      G    K       +KG + + G  GG
Sbjct: 391 PGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDGFDGEKGERGQMGPKGG 448


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.151    0.508 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,190
Number of Sequences: 2352
Number of extensions: 12389
Number of successful extensions: 53
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138973980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)