Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_N12
(1188 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 156 3e-38
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 156 3e-38
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 80 3e-15
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 80 3e-15
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 79 6e-15
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 48 1e-05
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 46 5e-05
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 35 0.098
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 31 2.1
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 4.9
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 156 bits (378), Expect = 3e-38
Identities = 80/123 (65%), Positives = 90/123 (73%)
Frame = +1
Query: 73 MQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSXY 252
MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE GRTLS Y
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 253 NIQKXSTLHLVLXLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTN 432
NIQK STLHLVL LRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++
Sbjct: 60 NIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSS 119
Query: 433 NLR 441
LR
Sbjct: 120 ELR 122
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 156 bits (378), Expect = 3e-38
Identities = 80/123 (65%), Positives = 90/123 (73%)
Frame = +1
Query: 73 MQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSXY 252
MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE GRTLS Y
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 253 NIQKXSTLHLVLXLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTN 432
NIQK STLHLVL LRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++
Sbjct: 60 NIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSS 119
Query: 433 NLR 441
LR
Sbjct: 120 ELR 122
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein 1,
isoform a protein.
Length = 838
Score = 80.2 bits (189), Expect = 3e-15
Identities = 48/86 (55%), Positives = 54/86 (62%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 754 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 812
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGGTI 309
GRTLS YNIQK STLHLVL LRGG I
Sbjct: 813 GRTLSDYNIQKESTLHLVLRLRGGDI 838
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 128
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 129 GRTLSDYNIQKESTLHLVLRLRGG 152
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 204
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 205 GRTLSDYNIQKESTLHLVLRLRGG 228
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 280
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 281 GRTLSDYNIQKESTLHLVLRLRGG 304
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 356
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 357 GRTLSDYNIQKESTLHLVLRLRGG 380
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 450 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 508
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 509 GRTLSDYNIQKESTLHLVLRLRGG 532
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 526 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 584
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 585 GRTLSDYNIQKESTLHLVLRLRGG 608
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 602 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 660
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 661 GRTLSDYNIQKESTLHLVLRLRGG 684
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 678 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 736
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 737 GRTLSDYNIQKESTLHLVLRLRGG 760
Score = 77.8 bits (183), Expect = 1e-14
Identities = 47/84 (55%), Positives = 52/84 (61%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 374 VLRLRGGMQIFVKTLIGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 432
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 433 GRTLSDYNIQKESTLHLVLRLRGG 456
Score = 77.0 bits (181), Expect = 2e-14
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = +1
Query: 73 MQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSXY 252
MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE GRTLS Y
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 253 NIQKXSTLHLVLXLRGG 303
NIQK STLHLVL LRGG
Sbjct: 60 NIQKESTLHLVLRLRGG 76
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 80.2 bits (189), Expect = 3e-15
Identities = 48/86 (55%), Positives = 54/86 (62%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 754 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 812
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGGTI 309
GRTLS YNIQK STLHLVL LRGG I
Sbjct: 813 GRTLSDYNIQKQSTLHLVLRLRGGDI 838
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 128
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 129 GRTLSDYNIQKESTLHLVLRLRGG 152
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 204
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 205 GRTLSDYNIQKESTLHLVLRLRGG 228
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 280
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 281 GRTLSDYNIQKESTLHLVLRLRGG 304
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 356
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 357 GRTLSDYNIQKESTLHLVLRLRGG 380
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 374 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 432
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 433 GRTLSDYNIQKESTLHLVLRLRGG 456
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 450 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 508
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 509 GRTLSDYNIQKESTLHLVLRLRGG 532
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 526 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 584
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 585 GRTLSDYNIQKESTLHLVLRLRGG 608
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 602 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 660
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 661 GRTLSDYNIQKESTLHLVLRLRGG 684
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 678 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 736
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 737 GRTLSDYNIQKESTLHLVLRLRGG 760
Score = 77.0 bits (181), Expect = 2e-14
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = +1
Query: 73 MQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSXY 252
MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE GRTLS Y
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 253 NIQKXSTLHLVLXLRGG 303
NIQK STLHLVL LRGG
Sbjct: 60 NIQKESTLHLVLRLRGG 76
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 128
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 129 GRTLSDYNIQKESTLHLVLRLRGG 152
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 204
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 205 GRTLSDYNIQKESTLHLVLRLRGG 228
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 280
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 281 GRTLSDYNIQKESTLHLVLRLRGG 304
Score = 79.0 bits (186), Expect = 6e-15
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 356
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 357 GRTLSDYNIQKESTLHLVLRLRGG 380
Score = 77.8 bits (183), Expect = 1e-14
Identities = 47/84 (55%), Positives = 52/84 (61%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEX 231
V R MQIFVKTL G T+ + K K + ++ QQRLIFAGKQLE
Sbjct: 374 VLRLRGGMQIFVKTLIGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLED 432
Query: 232 GRTLSXYNIQKXSTLHLVLXLRGG 303
GRTLS YNIQK STLHLVL LRGG
Sbjct: 433 GRTLSDYNIQKESTLHLVLRLRGG 456
Score = 77.0 bits (181), Expect = 2e-14
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = +1
Query: 73 MQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSXY 252
MQIFVKTL+G T+ + K K + ++ QQRLIFAGKQLE GRTLS Y
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 253 NIQKXSTLHLVLXLRGG 303
NIQK STLHLVL LRGG
Sbjct: 60 NIQKESTLHLVLRLRGG 76
Score = 48.8 bits (111), Expect = 7e-06
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +3
Query: 102 GXPIXLEVEASDTLENVKAKIQAKEGXPP 188
G I LEVEASDT+ENVKAKIQ KEG PP
Sbjct: 466 GKTITLEVEASDTIENVKAKIQDKEGIPP 494
Score = 30.7 bits (66), Expect = 2.1
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +1
Query: 52 VFHRRNTMQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSKPRKVFLQSQQRLIFAG 216
V R MQIFVKTL+G T+ + K K + ++ QQRLIFAG
Sbjct: 450 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENV-KAKIQDKEGIPPDQQRLIFAG 503
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 48.4 bits (110), Expect = 1e-05
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 73 MQIFVKTLSGVXPXHWRWKLPTLSKMSKLKSK--PRKVFLQSQQRLIFAGKQLEXGRTLS 246
M I VKTL+G + ++ ++K K ++ QQRLIFAGKQ+ +T +
Sbjct: 1 MLIKVKTLTG---KEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAA 57
Query: 247 XYNIQKXSTLHLVLXLRGG 303
Y + S LHLVL LRGG
Sbjct: 58 DYKVLGGSVLHLVLALRGG 76
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 46.0 bits (104), Expect = 5e-05
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +3
Query: 102 GXPIXLEVEASDTLENVKAKIQAKEGXP 185
G I LEVEASDT+ENVKAKIQ KEG P
Sbjct: 10 GKTITLEVEASDTIENVKAKIQDKEGIP 37
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 35.1 bits (77), Expect = 0.098
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +1
Query: 193 QQRLIFAGKQLEXGRTLSXYNIQKXSTLHLV 285
QQRLIF QLE R L YNI+ +HLV
Sbjct: 200 QQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 102 GXPIXLEVEASDTLENVKAKIQAKEGXPP 188
G I + ++ +DT+E +K K+Q K G PP
Sbjct: 170 GKTIPISIKNTDTVETLKFKVQNKHGVPP 198
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 30.7 bits (66), Expect = 2.1
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 76 QIFVKTLSGVXPXHWRWKLPTLSKMSKLKS--KPRKVFLQSQQRLIFAGKQLEXGRTLSX 249
QIFVK L GV + +K+ + +K+ + R Q L F+GK+LE ++
Sbjct: 155 QIFVKVL-GVS---YAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGD 210
Query: 250 YNIQKXSTL 276
YNIQK ST+
Sbjct: 211 YNIQKSSTI 219
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 190 SQQRLIFAGKQLEXGRTLSXYNIQKXSTLHL 282
S R++ K LE TL+ YNIQ+ STL L
Sbjct: 211 SSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 361 CRKCYARLHPRATNCRKTKCGHT 429
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,244,862
Number of Sequences: 27780
Number of extensions: 266600
Number of successful extensions: 664
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3255550896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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