Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_N06
(1289 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0027 - 195321-195932,197206-197415 36 0.069
08_01_0794 - 7687480-7687798,7687817-7688523 35 0.12
08_01_0799 + 7734031-7735102,7735453-7735475 34 0.21
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 33 0.65
08_02_1308 - 26024491-26025405 31 1.5
04_04_1221 + 31845938-31847038 31 2.0
10_08_0087 + 14730936-14732027 31 2.6
08_01_0200 + 1632883-1633913,1634620-1634677 31 2.6
10_08_0052 - 14491990-14493108 30 3.4
04_03_0994 - 21514495-21515610 30 3.4
10_08_0082 + 14713989-14714046,14714109-14714953 30 4.6
10_08_0079 + 14704086-14705195 30 4.6
10_08_0053 - 14496494-14497240,14497418-14497501,14497676-14498152 30 4.6
10_08_0051 + 14489255-14490403 30 4.6
07_01_0484 - 3643294-3643478,3644282-3644555,3644646-3645018,364... 30 4.6
04_03_0991 - 21500143-21500799,21500834-21501172 30 4.6
04_03_0990 - 21481459-21481933,21482140-21482771 30 4.6
10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886 29 6.0
08_01_0811 - 7872886-7873261,7873446-7873861,7874253-7874262,787... 29 6.0
08_01_0797 + 7711772-7712869 29 6.0
06_03_1064 - 27300735-27301829 29 6.0
10_08_0088 + 14734585-14734762,14735876-14736729 29 8.0
08_02_1251 - 25592537-25593380,25593589-25593893 29 8.0
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 35.9 bits (79), Expect = 0.069
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 336 LLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESV 443
+L + +H D T+ L HK +L++CSP FES+
Sbjct: 101 MLTESIHADVTINTTDGVLKAHKAILASCSPVFESM 136
>08_01_0794 - 7687480-7687798,7687817-7688523
Length = 341
Score = 35.1 bits (77), Expect = 0.12
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 309 STLVSVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
S ++ F LLEKG D T G+ + HK++L+A S F++ L
Sbjct: 174 SDILENFGELLEKGEGADVTFVVGGEKIAAHKIVLAARSSVFKAEL 219
>08_01_0799 + 7734031-7735102,7735453-7735475
Length = 364
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 309 STLVSVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
S L F LLEKG D T G+ + HK++L+A S F++ L
Sbjct: 175 SDLSENFGELLEKGEGSDVTFVVGGEKIAAHKIILAARSSVFKAEL 220
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 32.7 bits (71), Expect = 0.65
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 336 LLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
LL G D T +G+ HKV+L+A SP F + L
Sbjct: 304 LLTDGKRTDITFEVDGEVFPAHKVVLAARSPVFRAQL 340
>08_02_1308 - 26024491-26025405
Length = 304
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 336 LLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
LL++G D + +G+T H+ +L+A SP F + L
Sbjct: 121 LLDRGEGTDVSFLVDGETFPAHRAVLAARSPVFRAEL 157
>04_04_1221 + 31845938-31847038
Length = 366
Score = 31.1 bits (67), Expect = 2.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 309 STLVSVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
S L + F+ +L+ G D T GQ HK +L+ SP F++ L
Sbjct: 178 SNLHTDFENMLQDGEGSDVTFTVGGQEFRAHKCVLAFRSPVFKAEL 223
>10_08_0087 + 14730936-14732027
Length = 363
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 327 FDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
F LLE D L GQT H+ +L+A SP F + L
Sbjct: 184 FGDLLETEKGADVVLEVGGQTFAAHRCVLAARSPVFRAEL 223
>08_01_0200 + 1632883-1633913,1634620-1634677
Length = 362
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 360 DCTLAAEGQTLXXHKVLLSACSPYFESVL 446
D T A +G+T H+++L+A SP F++ L
Sbjct: 179 DVTFAVQGETFTAHRLMLAARSPVFKAEL 207
>10_08_0052 - 14491990-14493108
Length = 372
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 336 LLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
LLE G D T G+ + H+ +L+A SP F++ L
Sbjct: 189 LLESGDGADVTFRVAGEDVRAHRYILAARSPVFKAEL 225
>04_03_0994 - 21514495-21515610
Length = 371
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 336 LLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVLSXXYDK 464
LL G+ D T +G+T H+ +L+A SP F L +K
Sbjct: 191 LLATGVGADVTFEVDGKTFLAHRNVLAARSPVFHQELFSLTEK 233
>10_08_0082 + 14713989-14714046,14714109-14714953
Length = 300
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 336 LLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
LLE D GQTL H+ +L+A SP F++ L
Sbjct: 123 LLESEKGADVVFEVGGQTLAAHRCVLAARSPVFKAEL 159
>10_08_0079 + 14704086-14705195
Length = 369
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 327 FDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
F LLE D GQT H+ +L+A SP F + L
Sbjct: 189 FGDLLETEKGADVVFEVGGQTFAAHRCVLAARSPVFRAAL 228
>10_08_0053 - 14496494-14497240,14497418-14497501,14497676-14498152
Length = 435
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 336 LLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
LLE G D T G+ + H+ +L+A SP F++ L
Sbjct: 253 LLESGDGADVTFHVAGEEVPAHRYILAARSPVFKAEL 289
>10_08_0051 + 14489255-14490403
Length = 382
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 336 LLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
LLE G D T G+ + H+ +L+A SP F++ L
Sbjct: 193 LLESGDGADVTFHVAGEEVRAHRYILAARSPVFKAEL 229
>07_01_0484 -
3643294-3643478,3644282-3644555,3644646-3645018,
3645177-3645233,3646034-3646458
Length = 437
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 327 FDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFES 440
F TLL+ VD L+ G+ HK++L+A S F S
Sbjct: 215 FGTLLDNHEGVDVVLSVGGERFHAHKLVLAARSTVFRS 252
>04_03_0991 - 21500143-21500799,21500834-21501172
Length = 331
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 336 LLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
LL G D T G+T H+++L+A SP F + L
Sbjct: 169 LLATGEGADVTFEVSGKTFAAHRLVLAARSPVFRAEL 205
>04_03_0990 - 21481459-21481933,21482140-21482771
Length = 368
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 336 LLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
LL G D T EG+T H+ +L+A SP F L
Sbjct: 189 LLATGEGADVTFEVEGKTFAAHRWVLAARSPVFRVAL 225
>10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886
Length = 334
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +3
Query: 267 DDDQQFCLRXNNHXSTLVSVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
D D+ LR S L LL+ D G+T H+ +L+A SP F + L
Sbjct: 131 DGDRHRNLRHRASASDLNQKLGKLLDTEKGADVVFGVGGETFAAHRCVLAAQSPVFSAEL 190
>08_01_0811 -
7872886-7873261,7873446-7873861,7874253-7874262,
7874370-7875334
Length = 588
Score = 29.5 bits (63), Expect = 6.0
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +3
Query: 258 GIMDDDQQFCLRXNNHXSTLVSVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFE 437
G+ DDD L ++ + L +V+DT ++G D T + +G+ H+V+L+ SP F
Sbjct: 149 GVGDDD---VLPPSDMLAQLGNVYDT--KEG--ADVTFSVDGELFAAHRVILAMRSPVFR 201
Query: 438 SVL 446
+ +
Sbjct: 202 AAV 204
>08_01_0797 + 7711772-7712869
Length = 365
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 309 STLVSVFDTLLEKGMHV--DCTLAAEGQTLXXHKVLLSACSPYFES 440
S L F LLE+ V D + EG++ HK++L+A SP F++
Sbjct: 174 SELSEHFGKLLEEEEDVGRDVVFSVEGESFAAHKLVLAARSPVFKA 219
>06_03_1064 - 27300735-27301829
Length = 364
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 309 STLVSVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
S L + LLE D T G++ HK +L++ SP F + L
Sbjct: 169 SELHAYLGALLESKTGADVTFVVSGESFAAHKAILASRSPVFMAEL 214
>10_08_0088 + 14734585-14734762,14735876-14736729
Length = 343
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 327 FDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
F LLE D GQT H+ +L+A SP F + L
Sbjct: 164 FGDLLETEKGADVVFEVGGQTFAAHRCVLAARSPVFRAEL 203
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 29.1 bits (62), Expect = 8.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 381 GQTLXXHKVLLSACSPYFESVL 446
G+T H+ LL+ CSP F+++L
Sbjct: 232 GETFHAHRALLAVCSPVFKALL 253
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,933,026
Number of Sequences: 37544
Number of extensions: 261575
Number of successful extensions: 566
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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