Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_N06
         (1289 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical pr...    35   0.11 
U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical pr...    35   0.11 
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    34   0.19 
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    34   0.19 
AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    34   0.25 
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    30   3.1  
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       30   3.1  

>U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical
           protein C07D10.2a protein.
          Length = 390

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 309 STLVSVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
           S +    + L   G H D TL  E + L  HK +L+A SP F +++
Sbjct: 187 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMM 232


>U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical
           protein C07D10.2b protein.
          Length = 397

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 309 STLVSVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVL 446
           S +    + L   G H D TL  E + L  HK +L+A SP F +++
Sbjct: 194 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMM 239


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 321 SVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVLS 449
           S+F+ L  K    D  L  E + L  HKV+L+A  PYF  + +
Sbjct: 39  SIFNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFT 81


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 321 SVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVLS 449
           S+F+ L  K    D  L  E + L  HKV+L+A  PYF  + +
Sbjct: 39  SIFNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFT 81


>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 33.9 bits (74), Expect = 0.25
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +3

Query: 297 NNHXS-TLVSVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYFESVLS 449
           N+H + +++     L  + +  D TL    + +  H+V+LSACSPYF S+ +
Sbjct: 35  NSHFANSVLQQLGGLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFT 86


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = +3

Query: 255 EGIMDDDQQFCLRXNNHXSTLVSVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYF 434
           E I   ++       N    L+  +  L  + +  D  +   G+ +  HK +L+A SP F
Sbjct: 167 ETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPVF 226

Query: 435 ESVLS 449
            ++L+
Sbjct: 227 NAMLT 231


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = +3

Query: 255 EGIMDDDQQFCLRXNNHXSTLVSVFDTLLEKGMHVDCTLAAEGQTLXXHKVLLSACSPYF 434
           E I   ++       N    L+  +  L  + +  D  +   G+ +  HK +L+A SP F
Sbjct: 167 ETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPVF 226

Query: 435 ESVLS 449
            ++L+
Sbjct: 227 NAMLT 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,663,620
Number of Sequences: 27780
Number of extensions: 209242
Number of successful extensions: 338
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3610322468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)