Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_N02
         (1166 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    25   1.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   4.4  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +3

Query: 702 KRFQGNCVAIMVGGAAEALDSHPGKYKIILSRRKGFIRIAMKSGASLVPVFSFGETDV 875
           +RF G  V + VGG  +  D    KY+ IL      +   + S  +LV  F F   D+
Sbjct: 89  RRFPGLRVLLSVGGGEDIGDDGNIKYRTILESVDHRLAF-VNSAQALVKNFGFDGLDL 145


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -3

Query: 630 RTGTGNVPQALLNEASSPGITCGSLKRSWQMNN 532
           R G G+V     + ASSPG   G    S   NN
Sbjct: 149 RVGYGSVGLVGGDPASSPGAAAGRTGNSLSWNN 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,519
Number of Sequences: 336
Number of extensions: 5492
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34022010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)