Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_N02
         (1166 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase |S...   173   5e-44
SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces ...    28   2.2  
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k...    28   2.2  
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe...    26   8.7  
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d...    26   8.7  

>SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase
            |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 345

 Score =  173 bits (420), Expect = 5e-44
 Identities = 87/252 (34%), Positives = 144/252 (57%), Gaps = 1/252 (0%)
 Frame = +3

Query: 315  YWWLGILYAAWMLNDIDVCHKGGRTIQWVRNWGWWNYFRDYFPIKLVKTADLEPSKNYLF 494
            +W   I+Y  W++ D        R  +W+RN   + +F  YFPI+L KT +L+  KNY+F
Sbjct: 57   FWPFLIVYLIWLIYDDGFVTGKDRQKRWLRNAPPYRWFCHYFPIRLHKTTELDSEKNYIF 116

Query: 495  ACYPHGVLSSGAYCSFATNALNFHKLFPGLTPHLIVLGGHFLFPFFRDLILSLGTCASSQ 674
              +PHG++S GA+  FA+   +F KLFPG+   ++ L  +F  P +RD +++L   + S+
Sbjct: 117  GYHPHGIISLGAFGGFASEGADFSKLFPGINVSVLTLNSNFYVPVYRDYLMALNINSVSK 176

Query: 675  ESLLYLLNPKRFQGNCVAIMVGGAAEALDSHPGKYKIILSRRKGFIRIAMKSGASLVPVF 854
            +S + +L+ K   G+ V I++GGA E+L S PG+  ++L +R GF+++A  +G+SLVP F
Sbjct: 177  KSCVSILSRK--PGDSVLIVIGGAQESLLSRPGQNNLVLKKRFGFVKLAFLTGSSLVPCF 234

Query: 855  SFGETDVFRPLNNPXNSLLRRIQEKVRXITGVHXSSLLGXACXXIRXGCTS-QXSRKTVV 1031
            +FGE+D+F  ++N   + + + QE V+ I G       G        G    +     VV
Sbjct: 235  AFGESDIFEQVDNNPRTRIYKFQEIVKKIAGFTVPFFYGRGLLNKTFGLMPWRKPINIVV 294

Query: 1032 GAPMEVTXNLXP 1067
            G P++V     P
Sbjct: 295  GEPIDVPKKSHP 306


>SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 201

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = +1

Query: 217 GVSRPWPQPP--GCAWRCSGKARCCT 288
           GV    P+PP  GC WRCS     CT
Sbjct: 51  GVFATMPRPPLEGCRWRCSIALPNCT 76


>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
           kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 836

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
 Frame = -2

Query: 421 FHQPQFLTHCIVRPPLWHTSMSFSI----QAAYSIPSHQ*SEYSNVRKRYSSVPCPNSAK 254
           F  P  LT     P   H++    +    Q  YS  S   +E  N  KR +  P  N  K
Sbjct: 26  FLSPNNLTEQTCSPLRAHSTFKEPVFLLSQRQYSHNSKILTELINSVKRPNK-PDQNEEK 84

Query: 253 HTQAVAARVWRRRDMGTLKGAHSIPTLRDIFLN 155
               +  + ++   +   KG H    L++IFLN
Sbjct: 85  SAVGIEEKSFKDEHLAQKKGLHHFADLKEIFLN 117


>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 659

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 367 TSMSFSIQAAYSIPSHQ*SEYSNVRKRYSSV 275
           +S S+S     + PS+Q S Y N+ KR S++
Sbjct: 438 SSSSYSTAQISTFPSNQESIYKNINKRLSTL 468


>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
           dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 380

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 262 SAKHTQAVAARVWRRRDMGTLKGAHSIPTLRDIFLN 155
           S +  Q V  RVWR    G +KG   +P L   +L+
Sbjct: 307 STRPFQLVTGRVWRGCAFGGVKGRSQLPDLVKEYLD 342


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,386,801
Number of Sequences: 5004
Number of extensions: 93108
Number of successful extensions: 230
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 625545148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)