Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_N02
(1166 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0178 + 12652654-12652877,12652964-12653140,12653141-126532... 62 6e-10
02_05_0507 - 29617998-29618099,29618299-29618386,29618470-296185... 61 1e-09
09_04_0689 - 19480409-19480599,19480780-19480889,19481032-194811... 42 0.001
01_03_0292 - 14738016-14738316,14738570-14738655,14739002-147391... 34 0.19
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 33 0.33
06_01_1083 - 8859190-8859450,8859555-8859626 32 1.0
01_03_0289 - 14725832-14726114,14726216-14726298,14726432-147265... 31 1.7
01_03_0288 - 14714953-14715253,14716317-14716402,14716573-147166... 31 1.7
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 30 4.0
11_01_0739 - 6229029-6229856 29 5.3
08_02_0187 - 13978194-13979093,13980332-13980679 29 5.3
08_01_0955 + 9478018-9478773 29 5.3
12_01_1045 - 10739396-10739402,10739968-10740239,10740361-107409... 29 7.1
02_05_1020 - 33561454-33561568,33561839-33562070,33563286-335633... 29 7.1
04_04_1262 + 32200823-32201190,32201311-32201818,32201927-322020... 29 9.3
04_01_0294 + 3915821-3916166,3916380-3916849 29 9.3
02_01_0229 + 1524951-1526174 29 9.3
>06_02_0178 +
12652654-12652877,12652964-12653140,12653141-12653214,
12653424-12653530,12653637-12653792,12653933-12654019,
12654247-12654344,12654467-12654554,12654810-12654911
Length = 370
Score = 62.5 bits (145), Expect = 6e-10
Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Frame = +3
Query: 423 YFRDYFPIKL-VKTAD-LEPSKNYLFACYPHGVLSSGAYCSFATNALNFHKLFPGLTPHL 596
Y YFPI L V+ +P++ Y+F PH VL G + + + F L P +
Sbjct: 135 YAMGYFPISLHVEDYKCFDPNRAYVFGFEPHSVLPIGV--AALADLVGFMPL-----PKI 187
Query: 597 IVLGGHFLF--PFFRDLILSLGTCASSQESLLYLLNPKRFQGNCVAIMVGGAAEALDSHP 770
VL +F PF R + LG +++++ L G I+ GG E L
Sbjct: 188 KVLASSAVFYTPFLRQIWTWLGLIPATRKNFQSYLGA----GYSCIIVPGGVQEILHMDH 243
Query: 771 GKYKIILSRRKGFIRIAMKSGASLVPVFSFGETDVFR 881
L RKGF++IAM+SG LVPVF FG++ ++
Sbjct: 244 DSEIAFLKSRKGFVKIAMQSGCPLVPVFCFGQSYAYK 280
>02_05_0507 -
29617998-29618099,29618299-29618386,29618470-29618567,
29618680-29618766,29618887-29619042,29619228-29619334,
29619621-29619706,29619796-29619870,29619987-29620204
Length = 338
Score = 61.3 bits (142), Expect = 1e-09
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Frame = +3
Query: 435 YFPIKL--VKTADLEPSKNYLFACYPHGVLSSGAYCSFATNALNFHKLFPGLTPHLIVLG 608
YFP+ L +P++ Y+F PH VL + F L P + VL
Sbjct: 107 YFPVTLHVEDYKAFDPNRAYVFGYEPHSVLPIAL--GVLLELVGFMPL-----PKIKVLA 159
Query: 609 GHFLF--PFFRDLILSLGTCASSQESLLYLLNPKRFQGNCVAIMVGGAAEALDSHPGKYK 782
+F PF R + LG +S+++ L G I+ GG E L
Sbjct: 160 SSAVFYTPFLRQIWTWLGLVPASRKNFYSYLKA----GYSCVIVPGGVQEMLHMDHDSEV 215
Query: 783 IILSRRKGFIRIAMKSGASLVPVFSFGETDVFRPLNNPXNSLLRRIQEKVR 935
L RKGF++IAM++G+ LVPVF+FG++ V++ P L+ +I ++
Sbjct: 216 AFLKSRKGFVKIAMETGSPLVPVFAFGQSYVYK-WWRPGGKLIVKIARAIK 265
>09_04_0689 -
19480409-19480599,19480780-19480889,19481032-19481117,
19481410-19481523,19481697-19482066,19482216-19482346,
19482628-19482736,19482901-19483022,19483113-19483219,
19483447-19483551,19483654-19483812,19484071-19484126,
19484200-19484251,19486724-19486821,19487086-19487210
Length = 644
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = +3
Query: 624 PFFRDLILSLGTCASSQESLLYLLNPKRFQGNCVAIMVGGAAEALDSHPGKYKIILSRRK 803
P + D+ +G + + LL K F V + GGA EAL +YK+ +
Sbjct: 435 PSYYDMHRIMGAVPVTAGNFYKLLAEKHF----VLLYPGGAREALHRKGEEYKLFWPEQS 490
Query: 804 GFIRIAMKSGASLVPVFSFGETDV 875
F+R+A + GA+++P GE D+
Sbjct: 491 EFVRMASRFGATIIPFGVVGEDDI 514
>01_03_0292 -
14738016-14738316,14738570-14738655,14739002-14739115,
14739299-14739668,14739769-14739977,14740037-14740145,
14740257-14740378,14740873-14740979,14741393-14741447
Length = 490
Score = 34.3 bits (75), Expect = 0.19
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 723 VAIMVGGAAEALDSHPGKYKIILSRRKGFIRIAMKSGASLVPVFSFGETDV 875
V + GG EAL YK+ + F+R+A + G +++P GE DV
Sbjct: 310 VLLYPGGVREALHRKGEAYKLFWPDQPEFVRMAARFGVTIIPFGFVGEDDV 360
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 33.5 bits (73), Expect = 0.33
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 639 LILSLGTCASSQESLLYLLNPKRFQGNCVAIMVGGAAEALDSHPGKYKIILSRRKGFI-R 815
++L A + SLL L P+ G+C+ ++ GG AE K+ I G + R
Sbjct: 120 VVLKPSEVAPATSSLLAELLPRYVDGSCIKVVEGGVAETTTLLEQKWDKIFYTGNGKVGR 179
Query: 816 IAMKSGAS-LVPV 851
I M S A L PV
Sbjct: 180 IVMASAAKHLTPV 192
>06_01_1083 - 8859190-8859450,8859555-8859626
Length = 110
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = +1
Query: 217 GVSRPWPQPPGCAWRCSG---KARCCTSSSHCC 306
G RPW P CA RCS K C T + CC
Sbjct: 45 GNLRPWECSPKCAGRCSNTQYKKACLTFCNKCC 77
>01_03_0289 -
14725832-14726114,14726216-14726298,14726432-14726545,
14727830-14728199,14728726-14728856,14728970-14729078,
14729257-14729378,14729522-14729625,14729849-14729953,
14730034-14730192,14730336-14730391,14730576-14730627,
14730725-14731031
Length = 664
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 714 GNCVAIMVGGAAEALDSHPGKYKIILSRRKGFIRIAMKSGASLVPVFSFGETDVFRPL 887
G V + GG EAL ++++ + F+R+A + A++VP GE D+ L
Sbjct: 488 GEFVLLYPGGHREALHCKGEEHRLFWPDQTEFVRMAAQFNATIVPFGVVGEDDLMELL 545
>01_03_0288 -
14714953-14715253,14716317-14716402,14716573-14716686,
14716771-14717140,14717224-14717357,14717512-14717617,
14717733-14717854,14718125-14718231,14718522-14718622,
14719007-14719169,14719559-14719614,14720833-14721152
Length = 659
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 723 VAIMVGGAAEALDSHPGKYKIILSRRKGFIRIAMKSGASLVPVFSFGETDV 875
V + GG EAL Y++ + F+R+A + G +++P GE D+
Sbjct: 479 VLLYPGGIREALHRKDEDYQLFWPDQPEFVRMAAQFGVTVIPFGCVGEDDM 529
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 206 AHVAASPDPGRNRLGVLGAVRARHAAVPLP 295
A AASPDP R R V+G + A +PLP
Sbjct: 8 AAAAASPDPSRRREDVVGWLLALFPDLPLP 37
>11_01_0739 - 6229029-6229856
Length = 275
Score = 29.5 bits (63), Expect = 5.3
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +2
Query: 380 WSNNTVGQKLGLVELFPRLLPYQISQDSRFGTIQELPLRLLPSRSVVVGSVLFICHERFK 559
WS +TV L+++ ++ Y + T + + L LLP + VG +LFIC +
Sbjct: 197 WSMHTVM----LLDMLALMVAYAAGSVLDWETSKNVFLLLLPVH-IFVGGLLFICKQIQP 251
Query: 560 LPQVIPGLDASFNSAWGTFPVP 625
PQ G +A N+ + P P
Sbjct: 252 SPQDEAGPNAGANTQEISNPTP 273
>08_02_0187 - 13978194-13979093,13980332-13980679
Length = 415
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -2
Query: 310 EYSNVRKRYSSVPCPNSAKHTQAVAARVWRRRDMGTLKGAH-SIPTLRDI 164
EYS K + + + V DMG L G H ++PTLR I
Sbjct: 37 EYSQFNKLLTETRLAGDINRRRTITVLVVANGDMGALSGGHYTLPTLRHI 86
>08_01_0955 + 9478018-9478773
Length = 251
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 199 STCPCRGVSRPWPQPPGCAWRCSGKARCCTSSSHC 303
+T PC G PP AW C+ A C S C
Sbjct: 85 ATAPCAGAGSTTTAPPA-AWTCTRAAPRCRCPSRC 118
>12_01_1045 -
10739396-10739402,10739968-10740239,10740361-10740941,
10741566-10742586
Length = 626
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2
Query: 269 ARHAAVPLPHIAVL*LLVAWNT 334
A HAAV L H AVL LL+ WN+
Sbjct: 330 ALHAAVLLRHTAVLELLLKWNS 351
>02_05_1020 -
33561454-33561568,33561839-33562070,33563286-33563374,
33563856-33563944
Length = 174
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -1
Query: 248 PGGCGQGLETPRHGHVERSPFYPHTP*YFSKHVSRRFKHPNNNNXFXTR 102
PGG G G R RSP Y +P Y + S R + P + R
Sbjct: 107 PGGLGSGKRRSRSRSRSRSPQYRKSPTYGRRSYSPRDRSPRRRSVSPVR 155
>04_04_1262 +
32200823-32201190,32201311-32201818,32201927-32202031,
32202222-32202287,32202471-32202536,32202698-32202751,
32202895-32203041
Length = 437
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 379 PLWHTSMSFSIQAAYSIPSHQ*SEYSNVRKRYSSVPCPNSAKHTQAV 239
P W+ S F + AA ++ + + ++VR S P P A T A+
Sbjct: 245 PFWNPSAGFGMPAAVAVAAAAAQDQASVRSAKRSSPAPPRAAATLAL 291
>04_01_0294 + 3915821-3916166,3916380-3916849
Length = 271
Score = 28.7 bits (61), Expect = 9.3
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 191 GSFQRAHVAASPDPGRNRLGVLGAVRARHAAVPLPHIAVL*LLVAWNTVRCLDAKRHR-R 367
G R H+A D G ++LG +G + + A V P IA + A + A+ HR R
Sbjct: 111 GEELRGHLALRKDAGEDKLGQVGLLDKKLAKVARPTIAEAARVFARRSGLSRLARSHRIR 170
Query: 368 MPQGWSNNTVGQKLGLVELFPR 433
+G + + G++ L R
Sbjct: 171 DERGGEDRRRKARAGMIGLKAR 192
>02_01_0229 + 1524951-1526174
Length = 407
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -3
Query: 369 IRLCRLASKQRTVFQATSNQSTAM*GRGTAACLARTAPSTPRRLRPGSGD 220
+++C+L R + A + S GR A C T+PS PG D
Sbjct: 157 MKICKLVVMSRDLVAAIVSTSGGGGGRAVALCRPGTSPSWSAHHPPGGAD 206
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,284,059
Number of Sequences: 37544
Number of extensions: 663929
Number of successful extensions: 1902
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1899
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3561544780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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