Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_N01
(1230 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 35 0.10
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 34 0.24
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.72
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.72
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.72
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.72
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 32 0.96
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 31 1.3
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 31 2.2
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 30 2.9
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 2.9
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 30 3.9
L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family ... 30 3.9
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 30 3.9
AL023838-8|CAL36503.1| 79|Caenorhabditis elegans Hypothetical ... 30 3.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.1
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 29 5.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.1
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.7
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 29 6.7
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 6.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 7.1
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 8.9
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 35.1 bits (77), Expect = 0.10
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 825 SGWGXGKGPXF-RXGXGGXVFX*GPGXXXGGXXGVFXGGGGG 703
SGWG G+G + G GG G G GG G GGGGG
Sbjct: 62 SGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGG 103
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 822 GWGXGKGPXFRXGXGGXVFX*GPGXXXG--GXXGVFXGGGGG 703
GWG G GP + G GG + G G G G G + G GGG
Sbjct: 47 GWGGG-GPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGG 87
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 822 GWGXGK-GPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGG 706
GWG G G + G GG G G GG G GGGG
Sbjct: 54 GWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGG 93
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 33.9 bits (74), Expect = 0.24
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -1
Query: 801 PXFRXGXGGXVFX*GPGXXXGGXXGVFXGGG-GGFXXSPXG 682
P F G GG F G G GG G F GGG GG+ G
Sbjct: 4 PEFNRGGGGGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRG 44
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.72
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = -1
Query: 492 PXPPXGGXGXXVXGXGXXPXPXXXXXFPXGXG--GXFXXGKPXPPPPG 355
P PP GG G P P P G F G P PPPPG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = +1
Query: 1012 PRPXKXXKXGXPXPPPPXKKXXXXXXGPPGXXXXXXXXXKGGXPXXTXKKKNXRXXXGGX 1191
P P G P PPPP GPP GG P + GG
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPP------PPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 1192 XXXPPPP 1212
PPPP
Sbjct: 769 PPPPPPP 775
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 1038 GXPXPPAPPXKKXXXGXWPXGGXPXXXXXXKGGXXPXXPXKKKXXXGXRGXXXXXPPP 1211
G P PP PP G P G P GG P P G +G PPP
Sbjct: 740 GGPPPPPPPG-----GLPPISGGPPPPPPPPGGCPP--PPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.72
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = -1
Query: 492 PXPPXGGXGXXVXGXGXXPXPXXXXXFPXGXG--GXFXXGKPXPPPPG 355
P PP GG G P P P G F G P PPPPG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = +1
Query: 1012 PRPXKXXKXGXPXPPPPXKKXXXXXXGPPGXXXXXXXXXKGGXPXXTXKKKNXRXXXGGX 1191
P P G P PPPP GPP GG P + GG
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPP------PPPPPGGLPPISGGPPPPPPPPGGC 768
Query: 1192 XXXPPPP 1212
PPPP
Sbjct: 769 PPPPPPP 775
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 1038 GXPXPPAPPXKKXXXGXWPXGGXPXXXXXXKGGXXPXXPXKKKXXXGXRGXXXXXPPP 1211
G P PP PP G P G P GG P P G +G PPP
Sbjct: 740 GGPPPPPPPG-----GLPPISGGPPPPPPPPGGCPP--PPPPPPPGGFKGGPPPPPPP 790
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.72
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 905 GPPLGLKGGFSPPPRVGGGAF 843
GPP G GGF PPP G GA+
Sbjct: 424 GPPQGGPGGFGPPPPGGPGAY 444
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.72
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = -1
Query: 492 PXPPXGGXGXXVXGXGXXPXPXXXXXFPXGXG--GXFXXGKPXPPPPG 355
P PP GG G P P P G F G P PPPPG
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = +1
Query: 1012 PRPXKXXKXGXPXPPPPXKKXXXXXXGPPGXXXXXXXXXKGGXPXXTXKKKNXRXXXGGX 1191
P P G P PPPP GPP GG P + GG
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPP------PPPPPGGLPPISGGPPPPPPPPGGC 351
Query: 1192 XXXPPPP 1212
PPPP
Sbjct: 352 PPPPPPP 358
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 1038 GXPXPPAPPXKKXXXGXWPXGGXPXXXXXXKGGXXPXXPXKKKXXXGXRGXXXXXPPP 1211
G P PP PP G P G P GG P P G +G PPP
Sbjct: 323 GGPPPPPPPG-----GLPPISGGPPPPPPPPGGCPP--PPPPPPPGGFKGGPPPPPPP 373
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 31.9 bits (69), Expect = 0.96
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 822 GWGXGKGPXFRXGXGGXVFX*GPGXXXGGXXG-VFXGGGGGFXXSPXG 682
G G G G F G GG F G G GG G GGGGGF + G
Sbjct: 57 GGGGGGGGGFGGGNGG--FGGGGGGNYGGGGGNQGGGGGGGFNFNDIG 102
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -1
Query: 810 GKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGGFXXSPXG 682
G G G F G G GG G F GG GGF G
Sbjct: 37 GAGGDILGGLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGG 79
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = -1
Query: 825 SGWGXGKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGGFXXSPXG 682
+G G G+G R G G G G GG G GGGGGF G
Sbjct: 149 AGGGRGRGGRGRGGDRG-----GRGSDRGGRGGFGRGGGGGFRGGDRG 191
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -1
Query: 822 GWGXGKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGGFXXSPXGXPPXXXG 661
G G G G G GG G GG G GG GGF +P P G
Sbjct: 103 GGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGGFASAPVSLPAPSYG 156
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 786 GXGGXVFX*GPGXXXGGXXGVFXGGGGGFXXSPXGXPP 673
G GG + GP GG + GGGGG P G P
Sbjct: 60 GFGGNNYNNGPPPFDGGYNRPYGGGGGGGYGRPQGYVP 97
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/41 (46%), Positives = 20/41 (48%)
Frame = -1
Query: 822 GWGXGKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGGF 700
G+G G G R G GG GPG G G F GG GGF
Sbjct: 36 GFGGGPGQFGRGGFGG-----GPGSNYGPGRGGF-GGNGGF 70
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -1
Query: 822 GWGXGKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGGFXXSP 688
G+G G G + G GG G G G G GG GGF P
Sbjct: 48 GFGGGPGSNYGPGRGGFGGNGGFGGNGGFGGGPSYGGRGGFGGGP 92
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -1
Query: 810 GKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGGFXXSPXG 682
G G G F G G GG G F GG GGF G
Sbjct: 37 GAGGDILGGLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGG 79
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = -1
Query: 822 GWGXGKG--PXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGG 703
GWG G G R G GG G G GG + GGGGG
Sbjct: 232 GWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGG 273
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -1
Query: 822 GWGXGKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGG 703
G G G G + G GG G GG G GGGGG
Sbjct: 224 GGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGG 263
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -1
Query: 759 GPGXXXGGXXGVFXGGGGGF-XXSPXG 682
G G GG G F GGGGGF SP G
Sbjct: 484 GGGGGFGGGGGGFGGGGGGFGSGSPFG 510
>L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family
protein 1, isoform c protein.
Length = 113
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 810 GKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGGF 700
G G G F G G GG G F GG GGF
Sbjct: 37 GAGGDILGGLASNFFGGGGGGGGGGGGGGFGGGNGGF 73
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 810 GKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGGF 700
G G G F G G GG G F GG GGF
Sbjct: 37 GAGGDILGGLASNFFGGGGGGGGGGGGGGFGGGNGGF 73
>AL023838-8|CAL36503.1| 79|Caenorhabditis elegans Hypothetical
protein Y43C5A.7 protein.
Length = 79
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -1
Query: 819 WGXGKGPXFRXGXGGXVFX*GP-GXXXGGXXGVFXGGGGG 703
WG G P G GG GP G GG G GGG G
Sbjct: 22 WGFGGMPMGGMGMGGMGMMGGPYGGMGGGPYGGMGGGGWG 61
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 492 PXPPXGGXGXXVXGXGXXPXPXXXXXFPXGXGGXFXXGKPXPPPPG 355
P PP G G P P P G GG P PPPPG
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM-----PPPPPPG 340
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 591 PKXXPXXGVXPXAPPPXKXXXKXPPXXKGXNPEGIXKTXXXXXXXXXXXPPXPG 752
P P G+ P PPP PP G P PP PG
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/71 (23%), Positives = 19/71 (26%)
Frame = +1
Query: 1012 PRPXKXXKXGXPXPPPPXKKXXXXXXGPPGXXXXXXXXXKGGXPXXTXKKKNXRXXXGGX 1191
P P P PPPP PP G P + GG
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 1192 XXXPPPPKKXP 1224
PPP + P
Sbjct: 334 PPPPPPGMRYP 344
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -1
Query: 822 GWGXGKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGGF 700
G G G G G GG G G G G + GGGGGF
Sbjct: 178 GGGGGGGSHHHGGGGG-----GGGHHHHGGGGHYHGGGGGF 213
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 492 PXPPXGGXGXXVXGXGXXPXPXXXXXFPXGXGGXFXXGKPXPPPPG 355
P PP G G P P P G GG P PPPPG
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM-----PPPPPPG 350
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 591 PKXXPXXGVXPXAPPPXKXXXKXPPXXKGXNPEGIXKTXXXXXXXXXXXPPXPG 752
P P G+ P PPP PP G P PP PG
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/71 (23%), Positives = 19/71 (26%)
Frame = +1
Query: 1012 PRPXKXXKXGXPXPPPPXKKXXXXXXGPPGXXXXXXXXXKGGXPXXTXKKKNXRXXXGGX 1191
P P P PPPP PP G P + GG
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 1192 XXXPPPPKKXP 1224
PPP + P
Sbjct: 344 PPPPPPGMRYP 354
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -1
Query: 819 WGXGKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXG-GGGGFXXSPXG 682
+G G R G GG G G GG G + G GGGG+ G
Sbjct: 12 YGGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYG 58
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 6.7
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -1
Query: 822 GWGXGKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGGFXXSPXGXPPXXXG 661
G G G G G GG G G GG G GGG G +P PP G
Sbjct: 69 GGGCGGGGGGCGGGGGC--GGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGG 120
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = -1
Query: 819 WGXGKGPXFRXGXGGXVFX*GPGXXXGGXXGVFXGGGGGFXXSPXG 682
WG G GP GG + G G GG G GGGG + + G
Sbjct: 40 WGGGGGPGGWGNNGGGGWGRG-GGRGGGDWGGNNGGGGNWGGNGGG 84
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -1
Query: 477 GGXGXXVXGXGXXPXPXXXXXFPXGXGGXFXXGKPXPPPPGP 352
GG G G G G GG + G P PPPP P
Sbjct: 32 GGGGGCGGGGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPPPP 73
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = -1
Query: 816 GXGKGPXFRXGXGGXVFX*GP---GXXXGGXXGVFXGGG-GGFXXSPXG 682
G G G F G GG + G G GG G + GGG GG P G
Sbjct: 98 GYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGG 146
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 25.8 bits (54), Expect(2) = 7.1
Identities = 10/29 (34%), Positives = 11/29 (37%)
Frame = +1
Query: 1012 PRPXKXXKXGXPXPPPPXKKXXXXXXGPP 1098
P P P PPPP +K PP
Sbjct: 111 PAPQHGDHEASPPPPPPPRKSRAGGSSPP 139
Score = 21.4 bits (43), Expect(2) = 7.1
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +1
Query: 1183 GGXXXXPPPPKKXP 1224
GG PPPP + P
Sbjct: 134 GGSSPPPPPPPRVP 147
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.7 bits (61), Expect = 8.9
Identities = 22/84 (26%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Frame = +3
Query: 573 PPXGRXPKXXPXXGVXPXAPPPXKXXXKXPPXXKGXNPEGIXKTXXXXXXXXXXXPPXPG 752
P P P P PPP K + PP G P G P P
Sbjct: 115 PGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAG--PPGPDGNKGPLGPPGPPGPEGPN 172
Query: 753 XAPTXK--XXPLXPXGXXXPSXXP 818
P K P P G P+ P
Sbjct: 173 GEPGNKGPAGPPGPGGKPGPAGPP 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.150 0.514
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,490,478
Number of Sequences: 27780
Number of extensions: 323964
Number of successful extensions: 1414
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3401633308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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