Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M19
         (1176 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    26   0.48 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   4.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   5.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   5.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   7.8  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 26.2 bits (55), Expect = 0.48
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +3

Query: 366 EQIRKDIRTGQKCTNLEDMENYLSRTGVTMSKLDELSVVHVAGTKGKGSTSAMCESILRH 545
           E+ +++     +  N+ED+      TGV   KLDE+  V V G       ++   S LR 
Sbjct: 109 EEKKREFYIPPEVENVEDLFTSGITTGVNFMKLDEIE-VKVTGNDAPPPITSFETSGLRP 167

Query: 546 H 548
           H
Sbjct: 168 H 168


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 930 LAS*CPL*TLLFLVSCSLISKCD 862
           L S   L +L+FL +C+LI  CD
Sbjct: 236 LISNISLVSLIFLFNCTLIIMCD 258


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 378 KDIRTGQKCTNLEDMENYLSR-TGVTM 455
           +DI T  +   LE+M N+L R TG ++
Sbjct: 291 EDIFTPDRIPQLEEMSNFLKRHTGFSL 317


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 403 HFCPVLISFLICSIVDLFDCNLFNLRTA 320
           H C +   FL+C+++ +F     +L  A
Sbjct: 115 HICELHTIFLVCNVLTVFKIRYKDLNKA 142


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 525 CESILRHHG 551
           CE ++RHHG
Sbjct: 66  CEGVIRHHG 74


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -1

Query: 498 WFQQHEPQIARPTLTWSH-LFLTNN 427
           W Q  EP + RP L   H LFL +N
Sbjct: 102 WLQNVEPNL-RPKLLLKHNLFLLDN 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,480
Number of Sequences: 336
Number of extensions: 4703
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34331301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)