Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_M19
(1176 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0548 - 18685114-18685230,18685615-18685724,18685779-186858... 122 7e-28
03_01_0075 - 618917-618980,619752-619818,619874-620029,620237-62... 93 4e-19
12_02_1171 - 26669487-26669854,26670769-26670868,26670970-266711... 90 3e-18
02_01_0428 - 3127098-3129254 33 0.44
08_02_0805 + 21400345-21400701,21400797-21400975,21401223-214012... 31 2.3
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 31 2.3
02_01_0417 - 3048519-3048710,3048903-3050600,3050622-3050909,305... 30 3.1
02_01_0412 - 3005600-3007759 30 4.1
04_03_0883 - 20539784-20540308 29 5.4
02_01_0411 - 2998806-3000938 29 5.4
10_03_0034 + 7257033-7257045,7257074-7257104,7257880-7258009,725... 29 7.1
08_02_0923 - 22649420-22649605,22649694-22649774,22649867-226501... 29 7.1
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 29 7.1
11_06_0545 + 24839536-24843421,24843871-24844310 29 9.4
02_01_0429 - 3132848-3135043 29 9.4
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311... 29 9.4
>10_08_0548 - 18685114-18685230,18685615-18685724,18685779-18685802,
18686135-18686213,18686346-18686588,18686659-18686823,
18686960-18687037,18687185-18687231,18687319-18687379,
18687667-18687723,18688164-18688247,18689292-18689357,
18689447-18689574,18689693-18689885
Length = 483
Score = 122 bits (293), Expect = 7e-28
Identities = 59/107 (55%), Positives = 74/107 (69%)
Frame = +3
Query: 702 MPKYFAFLTVMAYNIFLKEKVDVAIVEVGIGGLVDYTNILRKVPVVGITALGLDHTSILG 881
MP YF FL ++A+ IF E+VDVA++EVG+GG D TN+++ V GI++LG DH ILG
Sbjct: 138 MPAYFRFLALLAFKIFSDEQVDVAVLEVGLGGKYDATNVVKAPVVCGISSLGYDHMEILG 197
Query: 882 NTIQEIAASKAGIMKRGCEAYTVQQPNEAMDVLIQYADSLKCPLTXV 1022
NT+ EIA KAGI+K+G AYTV QP EAM VL A L PL V
Sbjct: 198 NTLGEIAGEKAGILKKGVPAYTVPQPEEAMSVLKHRASELGVPLQVV 244
Score = 31.5 bits (68), Expect = 1.3
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 366 EQIRKDIRTGQKCTNLEDMENYLSRTGVTMSKLDELSVVHVAGTKGKGST 515
+++R D TG + E M YL + + L VVHVAGTKGK T
Sbjct: 86 QKVRAD--TGNRGNQWELMAKYLQILELE-EPIARLKVVHVAGTKGKDKT 132
>03_01_0075 - 618917-618980,619752-619818,619874-620029,620237-620315,
620797-620961,621070-621147,621327-621391,621433-621517,
621864-621920,622303-622386,622568-622650,623104-623164,
623292-623357,623468-623595,623696-623741
Length = 427
Score = 93.1 bits (221), Expect = 4e-19
Identities = 67/191 (35%), Positives = 100/191 (52%), Gaps = 14/191 (7%)
Frame = +3
Query: 471 LSVVHVAGTKGKGSTSAMCESILRHHGFRTGFYSSPHLVAVRERVRLNGRVISEDMFAKY 650
+ V+HVAGTKGK + + + + +P+ E +R++ ISE+ F KY
Sbjct: 69 MKVIHVAGTKGKNLNATNLH--INVYLCNSLLLFAPNC----ESIRVD---ISEEKFLKY 119
Query: 651 FHDVHQRLEDTQKFEGDMPKYFAFLTVMAYNIFLKEKVDVAIVEVGIGGLVDYTNILR-- 824
F +L++ + MP YF FL ++A+ IF E+VDVA++EVG+GG D TN++
Sbjct: 120 FWWCWNKLKEKTDDDIPMPTYFRFLALLAFKIFSAEQVDVAVLEVGLGGKFDATNVVYNF 179
Query: 825 -----KVPVV-GITALGLDHTSILGNTIQ---EIAASKAGIMK---RGCEAYTVQQPNEA 968
+ PVV GI +LG DH ILG + + + ++ +G AYT QP EA
Sbjct: 180 AHMQVEAPVVCGIASLGYDHMEILGKVVSCFCHVPCEQETHLEKLLKGVPAYTAPQPEEA 239
Query: 969 MDVLIQYADSL 1001
M L Q A L
Sbjct: 240 MIALKQRASEL 250
>12_02_1171 -
26669487-26669854,26670769-26670868,26670970-26671161,
26672475-26672537,26673197-26673347,26673614-26673711,
26673936-26674136
Length = 390
Score = 90.2 bits (214), Expect = 3e-18
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Frame = +3
Query: 480 VHVAGTKGKGSTSAMCESILRHHGFRTGFYSSPHLVAVRERVRL--NGRVISEDMFAKYF 653
VH+AGTKGKGST+A +I+R G+ G Y+SPHL+ +RER+ + +G +S ++ F
Sbjct: 69 VHIAGTKGKGSTAAFLSNIMREQGYNVGCYTSPHLLTIRERISVGQSGGPVSAELLRDLF 128
Query: 654 HDVHQRLEDTQKFEGDMPKYFAFLTVMAYNIFLKEKVDVAIVEVGIGG 797
+ + + + E +F T ++Y +F +E VD+AIVEV IGG
Sbjct: 129 GHAKEAIGQSIESEDGALTHFEVFTALSYLLFSQENVDIAIVEVIIGG 176
>02_01_0428 - 3127098-3129254
Length = 718
Score = 33.1 bits (72), Expect = 0.44
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -3
Query: 784 TSTMATSTFSLRNIL*AITVKNAKYFGMSPSNFCVSS 674
T+ T+T+ + N L A+ N + G +PS+FC+S+
Sbjct: 155 TAQFPTNTWKVMNNLVALNASNNSFTGQAPSSFCISA 191
>08_02_0805 +
21400345-21400701,21400797-21400975,21401223-21401271,
21401310-21401390,21401988-21402605
Length = 427
Score = 30.7 bits (66), Expect = 2.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 733 WLTIYSSRRRWMWPSWKSV 789
W RRRW WP+WK+V
Sbjct: 341 WRRSCDRRRRWGWPNWKAV 359
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 453 MSKLDELSVVHVAGTK--GKGSTSAMCESILRHHGFRT 560
+ KL EL V+H K G+G TSA+ ES+ H +T
Sbjct: 700 LGKLRELRVLHAKNLKLDGQGETSALLESLCNLHKIQT 737
>02_01_0417 -
3048519-3048710,3048903-3050600,3050622-3050909,
3052308-3052377,3052417-3052668,3053235-3055297
Length = 1520
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 784 TSTMATSTFSLRNIL*AITVKNAKYFGMSPSNFCVSSS 671
T ++T+ + L AI N + G PS FC+SSS
Sbjct: 166 TGAFPSTTWEKTSSLFAINASNNSFTGYIPSTFCISSS 203
>02_01_0412 - 3005600-3007759
Length = 719
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 784 TSTMATSTFSLRNIL*AITVKNAKYFGMSPSNFCVSSS 671
T ++T+ + L AI N + G PS FC+SSS
Sbjct: 167 TGAFPSTTWEKMSNLFAINASNNSFTGYIPSTFCISSS 204
>04_03_0883 - 20539784-20540308
Length = 174
Score = 29.5 bits (63), Expect = 5.4
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -2
Query: 974 IHSFVRLLHSVSFAASLHDARFRRCYFLYRVP*YRSVIQS*CRYADYGNFPQNIGIVD 801
+HS+ L+H+ AA+ HDA F+RC+ + VI S + + P GI D
Sbjct: 50 LHSYDDLVHAA--AAAAHDAYFKRCHTTPGYVSFEDVIGS-QEFEESSRRPPKAGISD 104
>02_01_0411 - 2998806-3000938
Length = 710
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 784 TSTMATSTFSLRNIL*AITVKNAKYFGMSPSNFCVSS 674
T +ST+ + L AI V N + G PS+FC+ S
Sbjct: 157 TGAFPSSTWEKMSNLVAINVSNNSFTGHIPSSFCIGS 193
>10_03_0034 +
7257033-7257045,7257074-7257104,7257880-7258009,
7258423-7258751,7259923-7260026,7260138-7260476,
7261074-7261199,7261366-7261489,7261615-7261723,
7262171-7262251
Length = 461
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 354 KSTIEQIRKDIRTGQKCTNLEDMENYLSRTGVTMSKLDELSVVHVAGTKGKG 509
K +Q+R DI + LED E Y V S DE ++ KGKG
Sbjct: 53 KGLQDQVRSDIMNSSYLS-LEDQEEYKMMGNVVFSSEDEGYKFYLGYAKGKG 103
>08_02_0923 -
22649420-22649605,22649694-22649774,22649867-22650146,
22650412-22650716,22650809-22650961,22651425-22652261
Length = 613
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 345 QSNKSTIEQIRKDIRTGQKCTNLEDMENYLSRTGVTMSKLDELS 476
Q +K T+E++++ I+ G+K N +NY T ++SK +LS
Sbjct: 493 QHHKPTVEELKEIIQEGKK--NAIKFQNYFESTIQSLSKQHDLS 534
>01_03_0179 + 13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 29.1 bits (62), Expect = 7.1
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 783 VGIGGLVDYT---NILRKVPVVGITALGLDHTSILGNTIQEIAASKAGIMKRGCEAYTVQ 953
+G G L+ YT N+L V + + LG + S+ + ++E A++ G + CE +
Sbjct: 797 IGFGALIGYTLLFNLLYTVALSFLKPLGDSYPSVPEDALKEKRANQTGEILDSCEEKKSR 856
Query: 954 QPNEAMDV 977
+ ++ V
Sbjct: 857 KKEQSQSV 864
>11_06_0545 + 24839536-24843421,24843871-24844310
Length = 1441
Score = 28.7 bits (61), Expect = 9.4
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 534 ILRHHGFRTGFYSSPHLVAVRERVRLNGRVISEDMFAKYFHDVHQRLEDTQKFEGDMPKY 713
+L+H +R FYS HLVA R + + RV ++ + HD+ + + +++ K
Sbjct: 631 LLKHSRYRVYFYS--HLVATRNKAKELLRVGADQHKGEDLHDLVNHILERCRWDSFSSKM 688
Query: 714 F 716
F
Sbjct: 689 F 689
>02_01_0429 - 3132848-3135043
Length = 731
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 784 TSTMATSTFSLRNIL*AITVKNAKYFGMSPSNFCVSS 674
T T+T + N L A+ N + G PS+ C++S
Sbjct: 168 TGKFPTTTCKVMNNLVALNASNNSFIGQIPSSLCINS 204
>02_01_0425 -
3102629-3104692,3106505-3108546,3109918-3109989,
3110157-3111444
Length = 1821
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 784 TSTMATSTFSLRNIL*AITVKNAKYFGMSPSNFCVSS 674
T T+T + N L A+ N + G PS+ C++S
Sbjct: 591 TGKFPTTTCKVMNNLVALNASNNSFIGQIPSSLCINS 627
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,693,116
Number of Sequences: 37544
Number of extensions: 535721
Number of successful extensions: 1286
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3596576368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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