Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_M19
(1176 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-5|AAC46527.1| 510|Caenorhabditis elegans Hypothetical pr... 214 1e-55
U23172-4|AAL02494.1| 521|Caenorhabditis elegans Hypothetical pr... 214 1e-55
U23172-6|AAV58869.1| 484|Caenorhabditis elegans Hypothetical pr... 213 2e-55
AL132847-2|CAB63372.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.68
AF144639-1|AAD44756.1| 552|Caenorhabditis elegans sphingosine-1... 31 1.2
AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine p... 31 1.2
U23452-1|AAK31545.2| 284|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL023815-5|CAA19428.2| 366|Caenorhabditis elegans Hypothetical ... 29 4.8
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 29 8.4
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 29 8.4
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 29 8.4
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 29 8.4
>U23172-5|AAC46527.1| 510|Caenorhabditis elegans Hypothetical protein
F25B5.6a protein.
Length = 510
Score = 214 bits (522), Expect = 1e-55
Identities = 115/254 (45%), Positives = 155/254 (61%)
Frame = +3
Query: 264 CRSYLLNXITVRMCSYYEXAVRKLNRLQSNKSTIEQIRKDIRTGQKCTNLEDMENYLSRT 443
C + L + + YE +VR LN LQSN +TI+++R R + NL YL
Sbjct: 20 CGANQLRMSSEKAVPCYEESVRLLNGLQSNAATIKKLRVQ-RENLQAINLPQCRKYLESL 78
Query: 444 GVTMSKLDELSVVHVAGTKGKGSTSAMCESILRHHGFRTGFYSSPHLVAVRERVRLNGRV 623
++ L+ L+++HV+GTKGKGS A ESILR G RTGFYSSPHLV VRER++++G+
Sbjct: 79 NISAEDLNALNIIHVSGTKGKGSACAFVESILRSQGLRTGFYSSPHLVHVRERIQVDGQP 138
Query: 624 ISEDMFAKYFHDVHQRLEDTQKFEGDMPKYFAFLTVMAYNIFLKEKVDVAIVEVGIGGLV 803
+SE MFA+ F V+ ++ ++ +MP YF FLT++A+ IF+K V V I+EVGIGG
Sbjct: 139 VSEQMFAEEFFHVYDIIK--REHSDNMPAYFKFLTLLAFRIFVKLNVQVMILEVGIGGEY 196
Query: 804 DYTNILRKVPVVGITALGLDHTSILGNTIQEIAASKAGIMKRGCEAYTVQQPNEAMDVLI 983
D TN++ K V G+T L DH SILGN + EIA KAGI K A+ EA +VLI
Sbjct: 197 DCTNVVEKPKVCGVTTLDYDHMSILGNKLSEIAWHKAGIFKESVPAFYSPTTTEAEEVLI 256
Query: 984 QYADSLKCPLTXVP 1025
A S PL P
Sbjct: 257 ARAISKHVPLFQTP 270
>U23172-4|AAL02494.1| 521|Caenorhabditis elegans Hypothetical protein
F25B5.6b protein.
Length = 521
Score = 214 bits (522), Expect = 1e-55
Identities = 115/254 (45%), Positives = 155/254 (61%)
Frame = +3
Query: 264 CRSYLLNXITVRMCSYYEXAVRKLNRLQSNKSTIEQIRKDIRTGQKCTNLEDMENYLSRT 443
C + L + + YE +VR LN LQSN +TI+++R R + NL YL
Sbjct: 31 CGANQLRMSSEKAVPCYEESVRLLNGLQSNAATIKKLRVQ-RENLQAINLPQCRKYLESL 89
Query: 444 GVTMSKLDELSVVHVAGTKGKGSTSAMCESILRHHGFRTGFYSSPHLVAVRERVRLNGRV 623
++ L+ L+++HV+GTKGKGS A ESILR G RTGFYSSPHLV VRER++++G+
Sbjct: 90 NISAEDLNALNIIHVSGTKGKGSACAFVESILRSQGLRTGFYSSPHLVHVRERIQVDGQP 149
Query: 624 ISEDMFAKYFHDVHQRLEDTQKFEGDMPKYFAFLTVMAYNIFLKEKVDVAIVEVGIGGLV 803
+SE MFA+ F V+ ++ ++ +MP YF FLT++A+ IF+K V V I+EVGIGG
Sbjct: 150 VSEQMFAEEFFHVYDIIK--REHSDNMPAYFKFLTLLAFRIFVKLNVQVMILEVGIGGEY 207
Query: 804 DYTNILRKVPVVGITALGLDHTSILGNTIQEIAASKAGIMKRGCEAYTVQQPNEAMDVLI 983
D TN++ K V G+T L DH SILGN + EIA KAGI K A+ EA +VLI
Sbjct: 208 DCTNVVEKPKVCGVTTLDYDHMSILGNKLSEIAWHKAGIFKESVPAFYSPTTTEAEEVLI 267
Query: 984 QYADSLKCPLTXVP 1025
A S PL P
Sbjct: 268 ARAISKHVPLFQTP 281
>U23172-6|AAV58869.1| 484|Caenorhabditis elegans Hypothetical protein
F25B5.6c protein.
Length = 484
Score = 213 bits (521), Expect = 2e-55
Identities = 113/238 (47%), Positives = 150/238 (63%)
Frame = +3
Query: 312 YEXAVRKLNRLQSNKSTIEQIRKDIRTGQKCTNLEDMENYLSRTGVTMSKLDELSVVHVA 491
YE +VR LN LQSN +TI+++R R + NL YL ++ L+ L+++HV+
Sbjct: 10 YEESVRLLNGLQSNAATIKKLRVQ-RENLQAINLPQCRKYLESLNISAEDLNALNIIHVS 68
Query: 492 GTKGKGSTSAMCESILRHHGFRTGFYSSPHLVAVRERVRLNGRVISEDMFAKYFHDVHQR 671
GTKGKGS A ESILR G RTGFYSSPHLV VRER++++G+ +SE MFA+ F V+
Sbjct: 69 GTKGKGSACAFVESILRSQGLRTGFYSSPHLVHVRERIQVDGQPVSEQMFAEEFFHVYDI 128
Query: 672 LEDTQKFEGDMPKYFAFLTVMAYNIFLKEKVDVAIVEVGIGGLVDYTNILRKVPVVGITA 851
++ ++ +MP YF FLT++A+ IF+K V V I+EVGIGG D TN++ K V G+T
Sbjct: 129 IK--REHSDNMPAYFKFLTLLAFRIFVKLNVQVMILEVGIGGEYDCTNVVEKPKVCGVTT 186
Query: 852 LGLDHTSILGNTIQEIAASKAGIMKRGCEAYTVQQPNEAMDVLIQYADSLKCPLTXVP 1025
L DH SILGN + EIA KAGI K A+ EA +VLI A S PL P
Sbjct: 187 LDYDHMSILGNKLSEIAWHKAGIFKESVPAFYSPTTTEAEEVLIARAISKHVPLFQTP 244
>AL132847-2|CAB63372.1| 343|Caenorhabditis elegans Hypothetical
protein Y48G10A.3 protein.
Length = 343
Score = 32.3 bits (70), Expect = 0.68
Identities = 27/78 (34%), Positives = 36/78 (46%)
Frame = +3
Query: 741 NIFLKEKVDVAIVEVGIGGLVDYTNILRKVPVVGITALGLDHTSILGNTIQEIAASKAGI 920
N F +EKV+ A + + D N +KVP+V LGLD S N Q + S A
Sbjct: 22 NNFTEEKVNTAFGAIKVSIYGD-RNDPKKVPMVTFHDLGLDSESNFQNFFQFV--SIAEF 78
Query: 921 MKRGCEAYTVQQPNEAMD 974
+ C Y V P + MD
Sbjct: 79 ADKFC-IYNVNAPGQEMD 95
>AF144639-1|AAD44756.1| 552|Caenorhabditis elegans
sphingosine-1-phosphate lyase protein.
Length = 552
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -2
Query: 869 SVIQS*CRYADYGNFPQNIGIVD*AAYTDFHDGHIHLLLEEY 744
S+++ +Y DY F + G V A YTD H HI+LL + Y
Sbjct: 118 SIMELAKKYEDYNTFNIDGGRVSGAVYTDRHAEHINLLGKIY 159
>AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine
phosphate lyase protein1 protein.
Length = 552
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -2
Query: 869 SVIQS*CRYADYGNFPQNIGIVD*AAYTDFHDGHIHLLLEEY 744
S+++ +Y DY F + G V A YTD H HI+LL + Y
Sbjct: 118 SIMELAKKYEDYNTFNIDGGRVSGAVYTDRHAEHINLLGKIY 159
>U23452-1|AAK31545.2| 284|Caenorhabditis elegans Hypothetical
protein R07G3.5 protein.
Length = 284
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 641 REVFSRCSPAT*RYT-EI*RRHAEILRVFDCDGLQYIPQG 757
R++F R SP+ + E+ HA ++R F C LQ+ P+G
Sbjct: 204 RKIFHRASPSQKEDSFELIVCHANVIRYFICRALQFPPEG 243
>AL023815-5|CAA19428.2| 366|Caenorhabditis elegans Hypothetical
protein H28O16.2 protein.
Length = 366
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +3
Query: 300 MCSYYEXAVRKLNRLQSNKSTIEQIRKDIRTGQKCTNLEDMENYLSRTGVTMSKLDELSV 479
M + + K+ Q K TIE ++ +K ED+E +G K++E S
Sbjct: 1 MADKLDEIIDKVASGQRKKDTIEDTEEEGTRKRKIEQFEDIERPNELSGFKKQKIEENSE 60
Query: 480 VHVAGTK 500
+H T+
Sbjct: 61 IHAEETE 67
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.7 bits (61), Expect = 8.4
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Frame = +3
Query: 417 DMENYLSRTGVTMSKLDELSVVHVAGTKGKGSTSAMC-ESILRHHGFRTGF-YSSPHLVA 590
DME R ++ + D L V T+GKG+ +A + + +G T + SPH
Sbjct: 374 DMEELKRRCKRSLLETDVLPVHPAVSTEGKGTAAAAALDDAVDRYGANTIYLLLSPHADV 433
Query: 591 VRE---RVRLNG----RVISEDMFAKYFHDVHQRLEDTQKFEGDMP 707
+E R R+N +V F +Y H +E T+K E + P
Sbjct: 434 QKEFFDRARINTIKHYQVFFPVPFVEY-HPTISGMEMTEKEEKETP 478
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.7 bits (61), Expect = 8.4
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Frame = +3
Query: 417 DMENYLSRTGVTMSKLDELSVVHVAGTKGKGSTSAMC-ESILRHHGFRTGF-YSSPHLVA 590
DME R ++ + D L V T+GKG+ +A + + +G T + SPH
Sbjct: 572 DMEELKRRCKRSLLETDVLPVHPAVSTEGKGTAAAAALDDAVDRYGANTIYLLLSPHADV 631
Query: 591 VRE---RVRLNG----RVISEDMFAKYFHDVHQRLEDTQKFEGDMP 707
+E R R+N +V F +Y H +E T+K E + P
Sbjct: 632 QKEFFDRARINTIKHYQVFFPVPFVEY-HPTISGMEMTEKEEKETP 676
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.7 bits (61), Expect = 8.4
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Frame = +3
Query: 417 DMENYLSRTGVTMSKLDELSVVHVAGTKGKGSTSAMC-ESILRHHGFRTGF-YSSPHLVA 590
DME R ++ + D L V T+GKG+ +A + + +G T + SPH
Sbjct: 374 DMEELKRRCKRSLLETDVLPVHPAVSTEGKGTAAAAALDDAVDRYGANTIYLLLSPHADV 433
Query: 591 VRE---RVRLNG----RVISEDMFAKYFHDVHQRLEDTQKFEGDMP 707
+E R R+N +V F +Y H +E T+K E + P
Sbjct: 434 QKEFFDRARINTIKHYQVFFPVPFVEY-HPTISGMEMTEKEEKETP 478
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.7 bits (61), Expect = 8.4
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Frame = +3
Query: 417 DMENYLSRTGVTMSKLDELSVVHVAGTKGKGSTSAMC-ESILRHHGFRTGF-YSSPHLVA 590
DME R ++ + D L V T+GKG+ +A + + +G T + SPH
Sbjct: 572 DMEELKRRCKRSLLETDVLPVHPAVSTEGKGTAAAAALDDAVDRYGANTIYLLLSPHADV 631
Query: 591 VRE---RVRLNG----RVISEDMFAKYFHDVHQRLEDTQKFEGDMP 707
+E R R+N +V F +Y H +E T+K E + P
Sbjct: 632 QKEFFDRARINTIKHYQVFFPVPFVEY-HPTISGMEMTEKEEKETP 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,670,829
Number of Sequences: 27780
Number of extensions: 470277
Number of successful extensions: 1159
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3213813064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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