Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M18
         (1225 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   2.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   2.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   6.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   8.1  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 764 YNLFYRFYGNEPGQNK 717
           YN F++FY +E  QN+
Sbjct: 477 YNSFHQFYSSESSQNQ 492


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 764 YNLFYRFYGNEPGQNK 717
           YN F++FY +E  QN+
Sbjct: 425 YNSFHQFYSSESSQNQ 440


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -2

Query: 369 PXTQHFGLHRAIGICDCDXRCTDXMSKXPCVS 274
           P T  +G+ + + +   D RC +      CVS
Sbjct: 440 PPTYDYGIPQGVVLNPLDARCNEIRPDAICVS 471


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 769 KVTIYSTGFMVMNLDKTKATKIV 701
           KVT +  G ++ N+ K +A KIV
Sbjct: 197 KVTDFFEGLILDNMQKREAEKIV 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,397
Number of Sequences: 336
Number of extensions: 2879
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35760828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)